Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3424 147 6e-30 seq261 132 1e-25 seq6553 116 1e-20 seq2338 87.8 5e-12 >seq3424 Length=5400 Score = 147 bits (162), Expect = 6e-30 Identities = 248/354 (70%), Gaps = 4/354 (1%) Strand=Plus/Plus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| ||||| ||| || || | ||||| |||||| || ||||| || || | Sbjct 3567 CCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 3626 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | || || ||||| || |||||||| || | | || | | || || | |||||| Sbjct 3627 ACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAAC 3685 Query 133424 GCCATTAGCGAATTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482 |||||| | || ||| ||||| ||||| | |||||||| || ||||||||| Sbjct 3686 GCCATT-GAGACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCA 3744 Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542 ||||||| || |||||| |||||||| || ||||||| || ||||| || || Sbjct 3745 GGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTT 3804 Query 133543 tttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602 ||||| ||||| || ||| || || ||||| || |||||||| | | ||||| || Sbjct 3805 CTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCT 3864 Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | ||||| ||||| || || || | ||||||| ||||||||||| ||||| Sbjct 3865 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 3918 >seq261 Length=22061 Score = 132 bits (146), Expect = 1e-25 Identities = 193/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||| | | ||||| | || |||||||| ||||| || | || || || || Sbjct 2036 GTCTTCAAGAGCCTTGACCAGTCGTCGCTGAATGTAACCCGTCTCGGCGGTCTTGACCGC 2095 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 |||||||| ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 2096 GGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTGAG 2155 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | | ||| |||| ||||||||||| || |||||||| | ||| |||||| Sbjct 2156 ACCACGAAGATACGAGTTCTCGACGAAACCACGGGCTTCGGGCGAGTAATCGTCCTTGGT 2215 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || | || || | ||| | || |||||||| || || ||| |||| Sbjct 2216 GAAATGAGGCAGCGTGCGGTACTTGAATCCGAAGGGAATACGCTTGCCTTCGACGATCTG 2275 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| | | | ||||||||||||| || Sbjct 2276 CTGTCCGACAAGGGCAGTCATCTGCGAAATGTT 2308 >seq6553 Length=2786 Score = 116 bits (128), Expect = 1e-20 Identities = 564/885 (64%), Gaps = 19/885 (2%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| ||| || | |||||| ||| || || || || ||||||||| | ||||||| Sbjct 1857 CGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCT 1798 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || | ||| || |||||||| || ||| | ||| | || ||||| ||| Sbjct 1797 GGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCT 1738 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || |||||| | |||| || || |||| |||| Sbjct 1737 GCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCG 1678 Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 || |||||| |||| || | ||| | | | ||||| || || || || ||| || Sbjct 1677 CCTTCTCATACTTTTCGTAAAGAGCCTC--GAACTCCTCGCCATAGCAGTCGGCCAGACC 1620 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCAT 155920 ||||||| | ||| || | || | ||| | || || ||| |||||| ||| Sbjct 1619 GGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGA---CACGCTTCAT 1563 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980 || | ||| ||| | ||| ||| ||||| | || |||||| | ||| Sbjct 1562 GAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCC 1503 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040 ||| ||||| || || || | ||| || | ||| | || ||||| || || || Sbjct 1502 GTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGAT 1443 Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097 ||||| |||| | |||| |||||||| || || ||||| ||||| || ||||| Sbjct 1442 GGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAA 1383 Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAAC 156156 ||||| ||||| || | | ||| ||||| || || ||||| || ||| || | || | Sbjct 1382 GACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCG-ATGTAAGAGC 1324 Query 156157 CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGA 156215 ||| | || | || | | || || |||||||| | |||| || || || Sbjct 1323 CAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG-CCATCTTGGAGATCATG 1265 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || ||| | ||||| ||||||| ||||| || |||| ||| | || Sbjct 1264 GCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGG 1205 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 |||| || | ||||| | || || ||||| ||||| || || || | ||||| Sbjct 1204 AAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGG 1145 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGACCC 156394 | || | || | ||||| | ||| |||||| | ||||| || |||| Sbjct 1144 GTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCC 1085 Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454 | || | || ||| || | ||| ||| ||||| |||||||| |||||| ||||| Sbjct 1084 CAG-ATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATC 1026 Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| || ||||| | || || ||||| || || || || || Sbjct 1025 AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 981 >seq2338 Length=6401 Score = 87.8 bits (96), Expect = 5e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAA-GCGAGA 251483 || || ||||| | | | ||||| || | ||| | || || ||||| ||| ||| | Sbjct 5439 CAGACGTGGACTCGGAAGGCATCCGACACCTCAAACAGACGCTCCTTGAGGAAAGCGGCA 5380 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 || ||||| | |||||| |||||||| ||||| || ||||| || ||||||||||| || Sbjct 5379 -GCTCCGTGGGCAATCATGCAATCACGTTCCATCTCTCCGAATCGCAGACCACCATCTCG 5321 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT 251570 || | ||| ||| | ||||| ||||| Sbjct 5320 GGCACGACCTTCGACGGGCTGGCGAGT 5294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471421928514934