Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 156 5e-32
seq6553 129 7e-24
seq860 125 9e-23
seq20422 122 1e-21
seq5925 120 4e-21
seq20083 111 2e-18
seq261 93.3 5e-13
>seq3424
Length=5400
Score = 156 bits (172), Expect = 5e-32
Identities = 214/291 (74%), Gaps = 15/291 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| ||||| ||||| ||||||||||| |||||
Sbjct 3901 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 3842
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296
||||||||| ||||||| | | || || ||| ||| ||||| ||||||||||| |||
Sbjct 3841 CTTGAGCCAGAAGATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCA 3784
Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353
||| ||| ||| |||| |||||| | |||| | |||| | |||||| ||
Sbjct 3783 AAGGCGACGAGACGCTGAGCAAAG--GACGAG----TTCTTGTCCTGGATCCATCGGATG 3730
Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTC 869412
|||||||||||||| || | | | || | || || |||||| ||||||| |||
Sbjct 3729 GCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTT 3670
Query 869413 CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
| || || || ||||||| |||||||| || |||||||| ||||||||
Sbjct 3669 C-GTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 3620
Score = 154 bits (170), Expect = 2e-31
Identities = 185/250 (74%), Gaps = 1/250 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| |||| |||||
Sbjct 4215 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 4156
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| ||||| | ||
Sbjct 4155 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACG 4096
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| |||||||||||||| |||||||||||||| ||||||| |||||||||||||||
Sbjct 4095 AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGC 4036
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | |||| ||| ||||| | ||| || |||||| ||| ||||
Sbjct 4035 AGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATG 3976
Query 868931 ATCTGCCTGG 868940
|| | |||||
Sbjct 3975 ATGT-CCTGG 3967
>seq6553
Length=2786
Score = 129 bits (142), Expect = 7e-24
Identities = 299/448 (67%), Gaps = 17/448 (4%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| || || |||| ||| ||||| || |||||||| || ||||||||
Sbjct 1412 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 1353
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || || | ||| | ||| | ||| || | ||| || | |||
Sbjct 1352 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 1293
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || || ||| ||||||||| | || || ||||| || || || || |||||
Sbjct 1292 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 1233
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| | |||||||| || || ||||| || || || || || | || ||
Sbjct 1232 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 1173
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| |||||||| ||||| | || |||||| || | | |||||| || ||||||
Sbjct 1172 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGT 1113
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| || || ||| | | |||||| |||| || ||||| | ||
Sbjct 1112 CTCCAGGACACGCTCAA---TATCGTC-----------ACCC-CAGATGCCGACAGACAC 1068
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484
||||||| ||||| |||||| ||||| || | ||| | |||| ||||||||
Sbjct 1067 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 1008
Query 1630485 CCGGCGCATG-GTCATGAGGCCAAAGTA 1630511
| || || | ||| ||| |||||||||
Sbjct 1007 TC-GCTCAAGAGTCTTGAAGCCAAAGTA 981
Score = 113 bits (124), Expect = 6e-19
Identities = 288/443 (65%), Gaps = 8/443 (2%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| || ||||||||||| || |||| | ||| | || |||||||||| |||||||
Sbjct 1851 ACTCGATAATCTCGGTGCAGAGATTGGAGCTACG-GATGGTGCCCAGGTTCTTCTGGTTG 1793
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| | ||||| | |||||||| ||||||| |||| |||||||||| ||||||||
Sbjct 1792 CTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCC 1733
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| |||||| |||||| || | || || | | || | ||||
Sbjct 1732 TCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCGCCTTC 1673
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| || || |||| ||||| ||| ||| ||||| |
Sbjct 1672 TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCAC 1613
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG---CGGCGCATAAAGAGG 1628457
||| ||||| | ||| | ||||| ||||| || | || || ||| |||||
Sbjct 1612 TCGTTGGGACACATGAGGGTCCAGT---CACCGTTCTTCTCGACACGCTTCATGAAGAGA 1556
Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517
|| |||| || || || |||||||| || ||| |||||||||||||||||||
Sbjct 1555 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 1496
Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577
|| ||||| || | || | | || |||||||| ||||| |||||| |||||||
Sbjct 1495 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 1436
Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600
|| || |||||| ||| ||
Sbjct 1435 GCACCAGGTCGCTTGTTGCCACC 1413
Score = 86.0 bits (94), Expect = 8e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 1627293 CGTCCACAGGCCGCGCGCCATCA-GGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGT 1627351
|| ||||||||| | | || || || ||||| ||| | ||||||| || || |
Sbjct 2507 CGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACT 2449
Query 1627352 CGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCGGTGT 1627411
|||| | ||| || |||||| |||||||||| |||| |||| | |||| |||
Sbjct 2448 CGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGT 2389
Query 1627412 TGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTGCGCA 1627471
|||||||||||||||| || |||| || ||||| | || | || || |||||| |
Sbjct 2388 TGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAA 2329
Query 1627472 GGCCGTGCT 1627480
||||||||
Sbjct 2328 TGCCGTGCT 2320
>seq860
Length=10614
Score = 125 bits (138), Expect = 9e-23
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| ||||||| |||||||||||||| || || ||| | || |||||| | || ||||||
Sbjct 8053 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 7994
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| ||||||||||| || ||||| || |||||||
Sbjct 7993 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 7945
>seq20422
Length=246
Score = 122 bits (134), Expect = 1e-21
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||| ||||||||| || || ||||| || || ||||| | ||||||||||||
Sbjct 86 GACAGCACCGGCGGCACCGTCACCTGCGTCATCCGTAATGTGCCCTCTGGCCTCGGCGAG 145
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| | |||||| ||||| ||||||||| |||| ||||| ||| |
Sbjct 146 CCCTGCTTCGACAAGCTGCAGGCCGTCCTCGCACACGCCATGATGTCCATCCCCGCCGTC 205
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT 19193
|||| |||||| ||||| ||| |||
Sbjct 206 AAGGCCTTCGAGTTTGGCTCCGGCTTT 232
>seq5925
Length=3129
Score = 120 bits (132), Expect = 4e-21
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105
|||| | || ||||||| |||| ||||||||| || ||||||||||||| || ||| ||
Sbjct 1918 AAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACAGC 1977
Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165
| || |||| |||||||| || || || |||||||||| || ||||||||||
Sbjct 1978 ATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGACC 2037
Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225
| || ||| | || |||||| ||| | | |||||||| |||| ||| || |||
Sbjct 2038 AGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGATGC 2097
Query 1574226 GCCATTCTG 1574234
||||| |||
Sbjct 2098 GCCATCCTG 2106
>seq20083
Length=211
Score = 111 bits (122), Expect = 2e-18
Identities = 146/203 (72%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 18223 ACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACG 18282
||||| || ||||| ||||| |||| |||||| |||||||| ||||||||| ||||
Sbjct 205 ACGCCCCGGAACGAAAAGGATCGTGTCACCATCCACTCGGGCACCGAGAACGGCGTCACC 146
Query 18283 CTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342
|||||| | || || |||| || ||||| |||||||||||| ||||| |
Sbjct 145 CTCGGCACCCCGATCCTCCTCACCGTCCCCAACGAGGACCAGCGGCCCAAGGACTACGGC 86
Query 18343 GACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAG 18396
|||| | || | ||||| ||| |||||||||| |||||| ||| |||
Sbjct 85 GACAAGACCATCGACCTCTACCCGCGCCCCAGCCACGCCGACTGGACCTACCTGGAAAAG 26
Query 18397 TACGGCATCAAGGCGTCGTCGGG 18419
|||||| ||||||| ||||| ||
Sbjct 25 TACGGCGTCAAGGCCTCGTCCGG 3
>seq261
Length=22061
Score = 93.3 bits (102), Expect = 5e-13
Identities = 257/386 (67%), Gaps = 16/386 (4%)
Strand=Plus/Minus
Query 511949 GGCGTGGACGCCTCGCGCAGTCACACCAACGACATCAACCGCGTGGCCGCCGTGCTGGGC 512008
||||| ||||| ||||| | ||||||||||| | | |||| || ||| | ||
Sbjct 595 GGCGTCGACGCTTCGCGGACATACACCAACGACCTGTGGCAAGTGGTCGAGGTGTTTGGT 536
Query 512009 ATCGAGGCCGCCGTGGCCGTGCTCTTTTCC--GAGATCAAGGCCGTCATCTCCTTTGACG 512066
|||||||| ||| | || ||||| || ||| | | ||| | | |||||||
Sbjct 535 ATCGAGGCAGCCC-GTTCG-GCTCTGGTCAAGGAGTTGACCAACGTGCTGGCGTTTGACG 478
Query 512067 GCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGCCGCGGAT 512126
| ||||||||||| | || ||| |||||||| || || |||| | | | ||||
Sbjct 477 GTTCCTACGTCAACCATCGTCACATTGCGCTGCTGACAGATGTCATGACGTACAGAGGAT 418
Query 512127 CGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCACGGCTTC-CTGTCGCGG 512185
| | ||| || || || ||||| ||||||| || || ||| | | | ||| |||
Sbjct 417 CCATCTCGGCTGTGACCCGACACGGTATCAACCGTGCTGA-CACTGGTGCTCTGATGCGT 359
Query 512186 GCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGGCCTTTGCCGAGACCGAC 512245
|||||||| ||||| ||||| ||| | | || || || || | || | || | |
Sbjct 358 TGTTCTTTCGAGGAGACGGTCGAGATCTTGCTCGAGGCTGCCGCGTCTG--GTGAGCTAG 301
Query 512246 AAGATCACCGACG--GCTCGGTGACCGAGCCCATCATCCTGGGCCAGACGGCGCCCATCG 512303
| || |||| | ||||| || || |||| |||||||||| |||||| || |
Sbjct 300 ATGACTGCCGAGGTATCTCGGAGAACG------TCATGCTGGGCCAGATGGCGCCAATGG 247
Query 512304 GCACGGCCATCTCGGACGTGCTCGTG 512329
|||||| | || || |||||| ||
Sbjct 246 GCACGGGTAACTTTGATGTGCTCCTG 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105417318821294
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