Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 188 1e-41
seq5925 141 1e-27
seq860 125 1e-22
seq3240 113 7e-19
seq6553 100 5e-15
seq261 91.5 2e-12
>seq3424
Length=5400
Score = 188 bits (208), Expect = 1e-41
Identities = 243/331 (73%), Gaps = 11/331 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| |||||
Sbjct 3901 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 3842
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| ||||||||||| ||
Sbjct 3841 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 3785
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| ||||||| |||| ||||| | | | || | | |||||| || ||
Sbjct 3784 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 3728
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575
||| || ||||| || | | |||| | || || |||||| ||||||| ||| |
Sbjct 3727 CCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 3668
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | | || ||||||| ||||||||| |||||||||||||||||||| ||||||||||
Sbjct 3667 TTGAG-CTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 3609
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || |||||||||||| || |||||
Sbjct 3608 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 3578
Score = 147 bits (162), Expect = 3e-29
Identities = 190/259 (73%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| ||||
Sbjct 4222 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 4163
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||||| |||||| | ||| ||||||| | | |||| ||||||| |||||
Sbjct 4162 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 4103
Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
||||| || ||||||||||||||||| || |||||||| ||||||| ||||||||
Sbjct 4102 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 4045
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| || || ||| || | |||| | | ||||| | ||| || ||||||
Sbjct 4044 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 3985
Query 794130 TCGATGATGATCTGCCTGG 794148
||| ||||||| | |||||
Sbjct 3984 TCGGTGATGATGT-CCTGG 3967
>seq5925
Length=3129
Score = 141 bits (156), Expect = 1e-27
Identities = 188/260 (72%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||||||| || ||||||| |||||||||||||| || |||||||||| || || |||
Sbjct 1916 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 1975
Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300
|| | || |||| |||||||| || |||||| |||||||||| ||| |||||||||
Sbjct 1976 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 2035
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| | || || | ||||||||| ||| | | ||||||| |||| || || |
Sbjct 2036 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 2095
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420
|||||||| || | | || | || || |||||| ||| ||| ||| |||
Sbjct 2096 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 2155
Query 2019421 TTATCGACGCCGAAAAGGTC 2019440
||||||| || |||||||||
Sbjct 2156 TTATCGAGGCGGAAAAGGTC 2175
>seq860
Length=10614
Score = 125 bits (138), Expect = 1e-22
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| ||||||
Sbjct 8053 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 7994
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| || || ||||| || |||||||
Sbjct 7993 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 7945
>seq3240
Length=5474
Score = 113 bits (124), Expect = 7e-19
Identities = 80/92 (87%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 1547 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 1488
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||||||| || | |||||||||||| ||||
Sbjct 1487 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 1456
>seq6553
Length=2786
Score = 100 bits (110), Expect = 5e-15
Identities = 177/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || |||||||| | ||||||||
Sbjct 1412 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 1353
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| || | |||
Sbjct 1352 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 1293
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| ||||||||| | || || | || || || || || || |||||
Sbjct 1292 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 1233
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | |||||||| | ||| ||||| || || || || | | || ||
Sbjct 1232 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 1173
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| |||||
Sbjct 1172 AGCATTGAAGAGGGTGGG 1155
Score = 98.7 bits (108), Expect = 2e-14
Identities = 336/515 (65%), Gaps = 14/515 (3%)
Strand=Plus/Minus
Query 2069277 GGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTTGAGGCCGCGACGCCACGCGTA 2069336
|||||||| | | || ||||| ||||||||||| ||||| |||||| | ||| ||
Sbjct 2786 GGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGC 2727
Query 2069337 GGCGTGCATCGACGTGATGGACTCGGCATTCGGGACGGCA--CA-GTAGAGGTTGAGCGA 2069393
|||||| ||||| || | | | | | | | || || || |||||| ||
Sbjct 2726 AAAGTGCATGCTGGTGAT---CTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGA 2670
Query 2069394 CTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGTCGATGGTCACGCGGTTGGA 2069453
|||| ||| || | ||| | |||||||| ||||| | | | | ||| | ||
Sbjct 2669 CTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGA 2610
Query 2069454 CACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGGCGGCACCTCGTCGTCATCAAA 2069513
| |||||| ||||||||| | |||||||||| | |||||| | | | ||
Sbjct 2609 AATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCT-CGGCGGGGA-TGTTGGGGAT---- 2556
Query 2069514 GCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCC 2069573
| ||| | || || | | | || |||| |||| | | | || |||||||||
Sbjct 2555 GTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCC 2496
Query 2069574 GCGCGCCATCATGCGC-TCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCA 2069632
| | || || | | | || ||| | ||||||| || || ||||| | ||| |
Sbjct 2495 -CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGA 2437
Query 2069633 CGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCT 2069692
| |||||| |||||||||| ||| |||| | |||| |||||||||||||||
Sbjct 2436 CACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCT 2377
Query 2069693 GCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCCGTACTGTC 2069752
|||| || |||| || ||||| | || | ||||| |||||| | ||||| ||
Sbjct 2376 GCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCT 2317
Query 2069753 GCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGG 2069787
||| || ||| ||| |||||||||||| ||
Sbjct 2316 TGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGG 2282
Score = 96.9 bits (106), Expect = 5e-14
Identities = 281/433 (65%), Gaps = 8/433 (2%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642
||||||||| || |||| | | | ||||||||||||||| ||||||||| | |||
Sbjct 1841 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 1783
Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702
|| | |||||||| |||||| |||| || |||||| |||||||| || |||||
Sbjct 1782 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 1723
Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759
| |||| | | | || || |||| | || | ||||
Sbjct 1722 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 1666
Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819
| || || || || | |||| | ||| ||| ||| ||||| |||| |
Sbjct 1665 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 1606
Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879
| || | ||| | |||||| ||| || | || || ||| || || ||| |||
Sbjct 1605 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 1546
Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939
| || | || || ||||| || ||| ||||||||||||||||||||| |||||
Sbjct 1545 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 1486
Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999
| || | || | || || |||||||| ||||| |||||| ||||||||| || |
Sbjct 1485 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 1426
Query 2072000 GCTTGCCGCCGCC 2072012
||||| ||| ||
Sbjct 1425 GCTTGTTGCCACC 1413
>seq261
Length=22061
Score = 91.5 bits (100), Expect = 2e-12
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|||||||| || |||||| |||| || ||||||||||||| || || || ||||||
Sbjct 3178 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 3119
Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737
|||||||||||||| |||||| ||| | | ||||| ||||||
Sbjct 3118 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 3074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914014448961098
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