Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 134 2e-26
>seq6553
Length=2786
Score = 134 bits (148), Expect = 2e-26
Identities = 631/988 (64%), Gaps = 32/988 (3%)
Strand=Plus/Minus
Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-TATTGTATTA 69325
||| || | ||| || || || || || || ||||||| || ||| || | || |
Sbjct 1901 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC-GCAGTACTCGATAA 1843
Query 69326 TCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTT 69382
|||| || || ||||| |||| ||| || ||||| || | ||| || |||||
Sbjct 1842 TCTCGGTGCAGAGATTGGAGCTACG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 1786
Query 69383 TGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAA 69442
||| ||| ||||||||| || || || || | || || || |||| | |||| |
Sbjct 1785 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA 1726
Query 69443 TAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCAT 69499
| | | ||| | | || || || ||||||| || ||| | | || ||||
Sbjct 1725 TGGCATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCAT 1669
Query 69500 ATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACAT 69555
| | | ||| | |||| ||||| || ||| ||| | || || ||| || || ||
Sbjct 1668 ACTTTTCGTAAAGAGCC--TCGAACTC--CTCGCCATAGCAGTCGGCCAGACCGGGGCAC 1613
Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615
|| || |||||||| | | ||| || | | | || || || ||||| || ||||||
Sbjct 1612 TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCG 1553
Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675
|||||||| ||||| | || || || | || | || || || || || ||
Sbjct 1552 GGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTG 1493
Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735
|| || || ||||| | | ||| | ||||| || || || || || || | | |
Sbjct 1492 CGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 1433
Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795
|| ||||| || || || ||||| || | ||| | ||||||||| || |||| | |||
Sbjct 1432 CCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGC 1373
Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855
|| || | | ||| || || |||| || || |||| || ||| || | || ||
Sbjct 1372 ATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGG 1313
Query 69856 ATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTT 69914
|| | | | | || || || || || ||||| || ||||| | ||||| ||
Sbjct 1312 AT-TCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTT 1254
Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974
| || ||||| |||||||| ||||| || ||| |||||| | || || || ||
Sbjct 1253 GAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGA 1194
Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034
|| ||| | || ||| || ||||| || | || || || || || ||||| ||||
Sbjct 1193 CAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTT 1134
Query 70035 TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAATTC 70090
|| | ||| ||||| || || | | || ||||| || | |||| |
Sbjct 1133 GCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATG----C 1078
Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCA 70150
| | | |||||||| | ||| ||||| || || || || | || || || || |
Sbjct 1077 CGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGA 1018
Query 70151 ACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGT 70210
||||| ||| || ||||| || || ||||| || | |||| ||||| | || |
Sbjct 1017 GGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCAT 958
Query 70211 AAATAATAACAGAATTTAGTTTATCCTT 70238
| | ||| | || | ||| | |||||
Sbjct 957 AGACAATGGCCGAGTCTAGCTCCTCCTT 930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686728640994480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |