Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6553 134 2e-26 >seq6553 Length=2786 Score = 134 bits (148), Expect = 2e-26 Identities = 631/988 (64%), Gaps = 32/988 (3%) Strand=Plus/Minus Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-TATTGTATTA 69325 ||| || | ||| || || || || || || ||||||| || ||| || | || | Sbjct 1901 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC-GCAGTACTCGATAA 1843 Query 69326 TCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTT 69382 |||| || || ||||| |||| ||| || ||||| || | ||| || ||||| Sbjct 1842 TCTCGGTGCAGAGATTGGAGCTACG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 1786 Query 69383 TGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAA 69442 ||| ||| ||||||||| || || || || | || || || |||| | |||| | Sbjct 1785 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA 1726 Query 69443 TAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCAT 69499 | | | ||| | | || || || ||||||| || ||| | | || |||| Sbjct 1725 TGGCATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCAT 1669 Query 69500 ATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACAT 69555 | | | ||| | |||| ||||| || ||| ||| | || || ||| || || || Sbjct 1668 ACTTTTCGTAAAGAGCC--TCGAACTC--CTCGCCATAGCAGTCGGCCAGACCGGGGCAC 1613 Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615 || || |||||||| | | ||| || | | | || || || ||||| || |||||| Sbjct 1612 TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCG 1553 Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675 |||||||| ||||| | || || || | || | || || || || || || Sbjct 1552 GGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTG 1493 Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735 || || || ||||| | | ||| | ||||| || || || || || || | | | Sbjct 1492 CGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 1433 Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795 || ||||| || || || ||||| || | ||| | ||||||||| || |||| | ||| Sbjct 1432 CCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGC 1373 Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855 || || | | ||| || || |||| || || |||| || ||| || | || || Sbjct 1372 ATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGG 1313 Query 69856 ATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTT 69914 || | | | | || || || || || ||||| || ||||| | ||||| || Sbjct 1312 AT-TCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTT 1254 Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974 | || ||||| |||||||| ||||| || ||| |||||| | || || || || Sbjct 1253 GAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGA 1194 Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034 || ||| | || ||| || ||||| || | || || || || || ||||| |||| Sbjct 1193 CAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTT 1134 Query 70035 TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAATTC 70090 || | ||| ||||| || || | | || ||||| || | |||| | Sbjct 1133 GCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATG----C 1078 Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCA 70150 | | | |||||||| | ||| ||||| || || || || | || || || || | Sbjct 1077 CGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGA 1018 Query 70151 ACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGT 70210 ||||| ||| || ||||| || || ||||| || | |||| ||||| | || | Sbjct 1017 GGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCAT 958 Query 70211 AAATAATAACAGAATTTAGTTTATCCTT 70238 | | ||| | || | ||| | ||||| Sbjct 957 AGACAATGGCCGAGTCTAGCTCCTCCTT 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686728640994480