Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6553 221 2e-52 >seq6553 Length=2786 Score = 221 bits (244), Expect = 2e-52 Identities = 1116/1753 (64%), Gaps = 43/1753 (2%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | ||| || |||||||| || ||||| || || | ||||| || | ||| Sbjct 2779 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 2720 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || | || |||| ||| || || | |||| || ||| | ||| |||| Sbjct 2719 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT-- 2662 Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531 | ||||||||| || || | || ||||| | || ||| | | | ||| |||| Sbjct 2661 GATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCC 2602 Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591 | || || ||||| ||||| || | ||||| | | ||| ||||||||||||| Sbjct 2601 AGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAAC 2542 Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 | | | | || | | ||||| | | ||||| || || || | |||| Sbjct 2541 CGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGT 2482 Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711 | |||| || |||||| | ||||| || |||||| | | | |||||| Sbjct 2481 CCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGA 2422 Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771 |||| | ||||| || || ||||| || || || |||| ||| || | || ||| | Sbjct 2421 TGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAG 2362 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| || || | || |||||||| |||| || | |||||||| | ||| ||| Sbjct 2361 TAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGA 2302 Query 110832 GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889 | |||||||| || | || || ||||| |||| ||||||| ||||| || | Sbjct 2301 GGTTCTCCCAGTCCCAGAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAAT 2244 Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT- 110948 || | || |||||||| |||| ||||| |||| ||| | | | |||| | Sbjct 2243 ACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTG 2184 Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008 ||| | || |||| || || || ||||| || ||||| | || | ||| Sbjct 2183 CACCGAA-GCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCAC 2125 Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 111066 || || || || ||| || | ||| || | || || |||| || ||||| || Sbjct 2124 GAGCCTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTG 2067 Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126 ||||| | |||||| |||| ||||||||| || || || || | ||| || || Sbjct 2066 GACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTA 2007 Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186 || ||| || | | ||| || || |||| || ||||| || || | Sbjct 2006 GTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAA 1947 Query 111187 TTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGA 111243 || | | ||| | || || || || | ||| || || ||||| | || Sbjct 1946 CTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGA 1890 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 || | ||||| ||||| |||||| | |||||| | ||| || || || | Sbjct 1889 AGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAG 1830 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||||| || || || |||| ||||| ||||| ||||| |||||| ||||| Sbjct 1829 ATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTT 1770 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 |||||||||| |||| | || ||||| ||||| | | ||| || || | ||| | | | Sbjct 1769 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTT 1710 Query 111423 CGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 | | | || |||| ||| | || | ||| || ||| |||||| ||| || | Sbjct 1709 CTGGGCCT----TCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAG 1654 Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 | || |||||||| ||| || ||||| ||||| || || || ||||| | || Sbjct 1653 CCTCGAACTCCTC-GCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGG 1595 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| | ||| || ||||||||||| || || |||||||| || | Sbjct 1594 GTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGG 1535 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || || || | || |||| || | || ||||| || | ||||||||||| Sbjct 1534 AACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCA 1475 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 111712 | || ||| |||||||| |||||||| |||| || | || || ||| | | Sbjct 1474 AAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG- 1418 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| ||| || || |||||||| || | | ||| Sbjct 1417 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 1358 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832 | || ||| || || || || ||| | |||| | | |||| || | Sbjct 1357 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTC 1298 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | || ||||| || ||| ||| ||||| ||||| | | ||||| |||| ||| Sbjct 1297 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 1238 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | || |||||| || || ||| |||||||| ||||| ||| || || Sbjct 1237 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 1178 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGT 112010 |||||||||||||||||||| || | || || |||| | | || |||||| || Sbjct 1177 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 1120 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||||| |||| ||||| || || || |||||||| | || ||||||| Sbjct 1119 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 1060 Query 112071 ACATGTACTGTGG 112083 ||||| ||| || Sbjct 1059 TCATGTGCTGGGG 1047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627867282907200