Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq6553 262 5e-65
seq3424 132 6e-26
>seq6553
Length=2786
Score = 262 bits (290), Expect = 5e-65
Identities = 938/1444 (65%), Gaps = 53/1444 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| ||| | |||| || || || || ||||| ||||
Sbjct 1047 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 1106
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339
||||||| ||| || |||||| || | | |||| || || | || |||||||
Sbjct 1107 CTGGAGACCTACAACCTGATGTCG--AGCAAATTCTTCACCCATGCCTCCCCCACCCTCT 1164
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||||||||||||| || || || ||||| |||||||| ||| || || ||||
Sbjct 1165 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAAAGAGG 1224
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | ||||| |||| ||||| | | ||||| ||||| ||| ||| |
Sbjct 1225 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 1284
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || || || |||| | | |||| | ||| || || || |
Sbjct 1285 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 1344
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | ||| | | || |||||||| || || ||| ||| || || || |
Sbjct 1345 ACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 1404
Query 104580 TAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGC 104633
| | || | ||| | | ||| || || | || |||| |||||||| ||||
Sbjct 1405 TCGACCAGGGTGG-CAAC--AAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 1461
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| || | ||||||||||| |||| ||||| || | ||||||| ||
Sbjct 1462 ACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 1521
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|||||| || ||| |||||||||||||| ||||||||||||||| | || ||| |||
Sbjct 1522 CCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 1581
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812
|| | ||| | ||| | ||||| || || || ||||| |||| ||| | ||
Sbjct 1582 ACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGC 1640
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCG 104866
|||||||| || || |||||| |||||| ||| | | | ||||| ||| |
Sbjct 1641 GAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGACCATG 1700
Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
| || |||| || | ||| | || || ||| || | || |||||||| || |
Sbjct 1701 AAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAAC 1754
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||||| ||||| ||| ||| |||| ||||| || || ||||| ||||
Sbjct 1755 CCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACC 1814
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
||| || ||||||||||| || || || | || | | | |||||| |||
Sbjct 1815 ATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCT 1874
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106
|| || ||||| || || | || || || | || || || || | || ||
Sbjct 1875 GTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGATGCTT 1929
Query 105107 GATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
| |||| | || | ||||| || || | |||| ||||| |||||
Sbjct 1930 G-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGG 1988
Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
|||| || || ||||| ||| | ||||| || || ||| |||||||
Sbjct 1989 ATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGA 2048
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279
|| |||||| | ||||| |||||||| || |||| ||| || || || || || || ||
Sbjct 2049 CCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CATGCCTT 2106
Query 105280 T-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338
| || || ||| || || |||| || || || |||||||| || || || |
Sbjct 2107 TCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTG 2166
Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395
| || || || || | || |||| ||| || ||||| || ||||| |||
Sbjct 2167 CCCTCACTGCTTCG-GTGC--AGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGG 2223
Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453
| ||||| || || | || | || || || || |||| |||| |||| | | ||
Sbjct 2224 GCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCTTCTGA 2281
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
| || |||||||| |||| ||| | |||||||| | || |||| ||||||||
Sbjct 2282 CCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCT 2341
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
|| | || || ||||| || ||| || | || ||| |||| || || || |||||
Sbjct 2342 GCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTT 2401
Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
|| || ||||| | |||||||| | | | | |||||| || ||||| | | ||
Sbjct 2402 CGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGT 2461
Query 105634 CAAC 105637
||||
Sbjct 2462 CAAC 2465
>seq3424
Length=5400
Score = 132 bits (146), Expect = 6e-26
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730
||||| |||| || || ||||| ||| | | ||| | | ||||| | ||||| |
Sbjct 3635 CTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 3693
Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789
|| | || ||||| | ||||| || || ||||| || ||| | | ||||
Sbjct 3694 GACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 3753
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| |
Sbjct 3754 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 3812
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
|| |||| | | || | |||||||||||||| || |||||||| || || ||| |
Sbjct 3813 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 3872
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||||| ||||||||||||||||| || ||| || |||||
Sbjct 3873 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 3918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583107825273680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |