Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06] 20,982 sequences; 49,446,642 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2352 116 3e-21 seq20342 100 2e-16 >seq2352 Length=6378 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| ||||| || ||||| || || || || || | Sbjct 1592 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACCCTTGAGGTGGAATCGTCC 1533 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || || ||||| Sbjct 1532 GACACCATTGACAATGTGAAATCGAAGA-TCCAGGACAAGGAAGGCATTCCTCCTGATCA 1474 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || || || |||| || ||| | |||| ||||| Sbjct 1473 ACAGCGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAA 1414 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 1413 CATCCAGAAGGAGTCGAC 1396 >seq20342 Length=208 Score = 100 bits (110), Expect = 2e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||||||||| || || ||||| ||||| || || || || Sbjct 193 ATGCAAATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTGGAGTCTTCG 134 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || || | || || || || Sbjct 133 GACACCATCGAGAATGTGAAGGC-CAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 75 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || ||||| |||| ||||| | | || ||||| Sbjct 74 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCGGACTACAA 15 Query 23790 CATACAAAAAGAGT 23803 ||| || || |||| Sbjct 14 CATCCAGAAGGAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337923164818856