Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680525.1_202016-07-06]
20,982 sequences; 49,446,642 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2352 116 3e-21
seq20342 100 2e-16
>seq2352
Length=6378
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| ||||| || ||||| || || || || || |
Sbjct 1592 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACCCTTGAGGTGGAATCGTCC 1533
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | || | | ||||| ||||| | || || |||||
Sbjct 1532 GACACCATTGACAATGTGAAATCGAAGA-TCCAGGACAAGGAAGGCATTCCTCCTGATCA 1474
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || || || |||| || ||| | |||| |||||
Sbjct 1473 ACAGCGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAA 1414
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 1413 CATCCAGAAGGAGTCGAC 1396
>seq20342
Length=208
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||||||||||| || || ||||| ||||| || || || ||
Sbjct 193 ATGCAAATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTGGAGTCTTCG 134
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || || | || || || ||
Sbjct 133 GACACCATCGAGAATGTGAAGGC-CAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 75
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || |||||||| || ||||| |||| ||||| | | || |||||
Sbjct 74 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCGGACTACAA 15
Query 23790 CATACAAAAAGAGT 23803
||| || || ||||
Sbjct 14 CATCCAGAAGGAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337923164818856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |