Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4896 120 3e-22
>seq4896
Length=3982
Score = 120 bits (132), Expect = 3e-22
Identities = 369/566 (65%), Gaps = 15/566 (3%)
Strand=Plus/Plus
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
|| ||||| || ||| || | |||||||| | ||| || ||||| ||||| |||
Sbjct 1437 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 1496
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
| || ||||| || || ||||| | ||| || || | ||| || | || |||
Sbjct 1497 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 1556
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||||||||||| ||||| |||| | || | || | | || || ||||
Sbjct 1557 AAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 1616
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199
| |||||| |||| ||||| || |||| || || || || || |||||
Sbjct 1617 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATACAGGGGATGGTCTCAATGGC 1675
Query 17200 CTTAAATAATTTC--TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257
|| || | | || || ||| | || | || || || || ||||| || |
Sbjct 1676 GTTGAAGAGGTAGGTTCGTTGAGCTG--GCTCCTTGATGTAGGTGTCAATGAGGAGCGAG 1733
Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317
|| | |||||||| ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct 1734 TAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCG 1793
Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377
| || || || || || |||||| || | || || ||||| |||||||||||
Sbjct 1794 GGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAG 1853
Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG- 17436
|| ||||| || || | || || | ||| | | ||||| | || || |||
Sbjct 1854 GCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGG 1910
Query 17437 -----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491
|||||| | | ||| ||||||| ||| | || |||| ||||| ||| |||
Sbjct 1911 TTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCC 1970
Query 17492 ACTGCCTTTTTATACATATTCCAAAT 17517
| ||||| || ||||| | ||| ||
Sbjct 1971 TCGGCCTTCTTGTACATCTGCCAGAT 1996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517382016774480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |