Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1296 123 3e-23
seq1987 89.7 6e-13
>seq1296
Length=8565
Score = 123 bits (136), Expect = 3e-23
Identities = 217/312 (70%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604
||||| ||| | |||| | ||| |||| ||||||| | |||| ||||||||| |
Sbjct 622 CATCTTCATTGCAATGGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 563
Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660
| | || ||| | ||| ||| ||| || || ||| |||||| ||||
Sbjct 562 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 504
Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
| ||| | ||| |||| || || | |||||||||| ||||||||||||||| ||
Sbjct 503 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 445
Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779
|||| |||||| ||| | || ||| | | | || ||| || | ||||| |||
Sbjct 444 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 385
Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839
||||| | ||||||||| |||||||| || || || || |||||||| | || ||||||
Sbjct 384 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 325
Query 145840 TACAGCTGGCAG 145851
|| || ||||||
Sbjct 324 TAGAGTTGGCAG 313
>seq1987
Length=8139
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 146124 GAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCA 146181
|||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| |||
Sbjct 8 GAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCTGG 66
Query 146182 TTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAG 146241
| |||| ||| ||| |||||||||||| ||||| ||| ||| | | ||||
Sbjct 67 T-GGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAAG 125
Query 146242 ACCCTCTTGGTGGTCAGCAGGGGGA 146266
|| | ||||||||| || |||||||
Sbjct 126 ACGCGCTTGGTGGTGAGGAGGGGGA 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589890291475440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |