Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1296 123 3e-23 seq1987 89.7 6e-13 >seq1296 Length=8565 Score = 123 bits (136), Expect = 3e-23 Identities = 217/312 (70%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | |||| | ||| |||| ||||||| | |||| ||||||||| | Sbjct 622 CATCTTCATTGCAATGGTCTTGTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTT 563 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGA----TCCTGAGCCTGGGAAAGGGCCGGG 145660 | | || ||| | ||| ||| ||| || || ||| |||||| |||| Sbjct 562 CCACCCGTCGATG-CTTCCGCCCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGG 504 Query 145661 GGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 | ||| | ||| |||| || || | |||||||||| ||||||||||||||| || Sbjct 503 G-CTCGCGCTCAAGCTGCGTGTTGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCG 445 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 |||| |||||| ||| | || ||| | | | || ||| || | ||||| ||| Sbjct 444 CCCATGACGTGAGTGAGGCTGCCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTC 385 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 ||||| | ||||||||| |||||||| || || || || |||||||| | || |||||| Sbjct 384 AGCAGTGCGTAGCTGGCAATGTTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGG 325 Query 145840 TACAGCTGGCAG 145851 || || |||||| Sbjct 324 TAGAGTTGGCAG 313 >seq1987 Length=8139 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 146124 GAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCA 146181 |||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| ||| Sbjct 8 GAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCTGG 66 Query 146182 TTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAG 146241 | |||| ||| ||| |||||||||||| ||||| ||| ||| | | |||| Sbjct 67 T-GGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAAG 125 Query 146242 ACCCTCTTGGTGGTCAGCAGGGGGA 146266 || | ||||||||| || ||||||| Sbjct 126 ACGCGCTTGGTGGTGAGGAGGGGGA 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589890291475440