Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7620 136 8e-27 seq4896 122 2e-22 >seq7620 Length=2775 Score = 136 bits (150), Expect = 8e-27 Identities = 187/259 (72%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| || || || |||||||||| || || ||| ||||||||||||||||| Sbjct 1513 GCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACC 1572 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||||||||| || |||| | | | | |||||||| ||||| || || || | || Sbjct 1573 CTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGT 1632 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || |||||||| |||||||| || | | |||||||| || | || Sbjct 1633 ACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTA 1692 Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 || || | |||| | || || | | || | |||||||||| ||||||||| |||| Sbjct 1693 GGTCTCCAGGACACGCTCAATATCGTCACCCCAG-ATGCCGACAGACACACGCATGATCA 1751 Query 95024 TGTCCTGAGGGCGCTCAAC 95042 ||| ||| || |||||||| Sbjct 1752 TGTGCTGGGGACGCTCAAC 1770 >seq4896 Length=3982 Score = 122 bits (134), Expect = 2e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || || || |||||||| || ||||| || || ||||| |||||| Sbjct 1585 GTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 1526 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||| || |||| ||||| ||| |||| ||| | ||| Sbjct 1525 CTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 1466 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGC 102064 || |||||||| ||||||||||||| Sbjct 1465 GAGGGTCTTCACACCGACTTTGCATGC 1439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989263397668130