Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4896 95.1 9e-15 >seq4896 Length=3982 Score = 95.1 bits (104), Expect = 9e-15 Identities = 291/448 (65%), Gaps = 14/448 (3%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | |||||||| || || || || || | || || | ||||| |||| Sbjct 1591 CGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATC 1532 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| |||||||| || || | |||||||||||| | || Sbjct 1531 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCT 1472 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCA-AACAA 22919 |||||||| ||||| ||| |||||||| || | || | | | || ||| Sbjct 1471 CGTGACGAGGGTCTTCACACCGACTTTGCATGCCTCCT-------CCACTCCCACCTCAA 1419 Query 22920 --ACCGTGTCAGGACGATGCACATC----AAATCATATCTGATGCCGTTGACATTGAGAC 22973 ||||| ||| | | | |||| | ||||| | |||||||| ||||||| Sbjct 1418 GGGCCGTGCCAGCAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCA 1359 Query 22974 GGCTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAG 23033 || ||| | ||||| || |||| || || ||||| ||| |||| Sbjct 1358 GGAGTTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAA 1299 Query 23034 ACTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTA 23093 | |||||| |||| || || || ||||| |||| ||||| || | | ||| | || Sbjct 1298 GCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTA 1239 Query 23094 TAACGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTT 23153 || | |||| || || || |||||||| ||||| | | | || || || ||||| Sbjct 1238 CAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 1179 Query 23154 CTTTGAACGCCGTGTGAGTGAATATCAG 23181 ||| || ||||| |||| || ||| Sbjct 1178 CTTCGAGAAGCGTGTCGGTGACTACCAG 1151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356123818378258