Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq11615 87.8 2e-12 >seq11615 Length=1520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/277 (68%), Gaps = 18/277 (6%) Strand=Plus/Minus Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCGAGGTG 99561 ||| |||||||| | ||||||||||| | | | | ||| || ||||| |||| Sbjct 680 CGCTCCCAGCCCCGATTGGCGTGCGAGTTGGCCTCATGGGCCCGGACAGTGAGACAGGTA 621 Query 99562 TTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAG-----CCGTGCT--GCGG 99614 || |||| ||||| |||||| |||||| | | | | || || |||| |||| Sbjct 620 TTCAGCATGAGCACACCGCGGTCCGCCCAAG-GTGTAAGAAGTCCTCCCTTGCTGGGCGG 562 Query 99615 CCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCT-----GGAGGCTG 99669 | || | || ||| ||| |||| | ||| ||| ||||||| | |||| | Sbjct 561 CGGCTCGAAGCCCGGGTAGTCTTTCTTGAGGGCAATGTACATGTTCTTGAGGGAAGGCGG 502 Query 99670 GGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTG 99729 |||||| || | | || |||| |||||||| || |||||||| || | || Sbjct 501 TGCGGGAGTGGGAGGTCG-----CACGGAAAAGGCCAGTCCATGGGCCTGGTTGTTGTTG 447 Query 99730 TGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGT 99766 || |||||||| ||||| | |||||| |||||||||| Sbjct 446 TGATAGGGGTCTTGGCCGACGATGACAACCTTGACGT 410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440759842785360