Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7620 390 3e-103
>seq7620
Length=2775
Score = 390 bits (432), Expect = 3e-103
Identities = 1080/1632 (66%), Gaps = 38/1632 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || ||| | || || | | ||||||||| |||| | || ||| |||| ||
Sbjct 1668 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 1609
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||| || || ||| |||||||| | ||| || || ||||
Sbjct 1608 TGCTTCCTGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 1549
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || || || || || | | || ||||| | |||||
Sbjct 1548 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACG-TCCACCGAATCCGTGC 1490
Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| | | |||||| ||| || || || ||| || || | |||||||||
Sbjct 1489 CACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTT 1432
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| ||||||||||||||||||| ||||| || ||
Sbjct 1431 CGTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCC 1372
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || || ||||| || || ||| | |||||||| ||||| || || ||
Sbjct 1371 TTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAG 1312
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || ||||| | || || || || |||||| || || ||| || | ||
Sbjct 1311 AACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGAT 1252
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| || ||| | | | | | ||| | ||| | || || |||| |
Sbjct 1251 CTCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGT 1194
Query 364022 GTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
| || ||||| |||| || ||||| | | || | | ||||| ||||||||||||||
Sbjct 1193 GCCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGA 1136
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|| ||| |||| ||| ||||| || || |||||||| |||| ||||||| | ||
Sbjct 1135 GAAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGA 1076
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
|||||| ||||| || | |||| ||| | ||||| || ||||||||||||
Sbjct 1075 GGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAG 1016
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAAT 364258
||||||| || |||| || || || | | || | || || || ||||||||||| || |
Sbjct 1015 CAACCAGAAGAACCTGGGCACCATCC-GTAGCTCCAATCTCTGCACCGAGATTATCGAGT 957
Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318
|| ||| || || ||| ||| || || |||||||| || | || || || ||||
Sbjct 956 ACTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCA 897
Query 364319 TAA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372
| | | |||| | || | |||| |||| | | | ||||| || | ||
Sbjct 896 TCAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCG 837
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427
| |||| || ||| | |||||||| ||| | || || || | ||||| || |
Sbjct 836 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 777
Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487
|| || ||||| || || || |||||| ||||||| ||||| || ||||| | |||
Sbjct 776 GC-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTT 722
Query 364488 TATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
| ||||| ||| | || || || || || ||||||| || || ||| |||||
Sbjct 721 CCT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATC 664
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604
|| || || || || ||| || | ||||||||| ||| | |||| || ||||
Sbjct 663 TTCGAGACCATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGG 605
Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664
||||| || | |||| || || || |||| | ||||||| || | ||
Sbjct 604 TCCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTG 545
Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724
|||||| | ||| |||| || ||| ||||||| | || | | || ||| ||||
Sbjct 544 GAATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCA 485
Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784
|| | ||||||| || | || || ||||| || || |||| | ||||||||
Sbjct 484 CGGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCT 425
Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844
|| ||||||||||||||||| || | || ||| | || ||||| || || |
Sbjct 424 GGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGC 365
Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904
|| || || | ||| || || | || ||||||| ||| ||| || |||||
Sbjct 364 TGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTG 305
Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964
| || |||||| ||| ||||| |||| || ||||| | |||||||| ||
Sbjct 304 GTCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAA 245
Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024
| || | || | ||| | | ||||| ||||| ||||| ||||| ||| |
Sbjct 244 CATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGT 185
Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084
| || | ||||| ||||| || ||||| || || |||| |||||| | ||| |
Sbjct 184 CGTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 125
Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144
||||| | || ||| | |||| | || |||||| || ||| ||||| |||
Sbjct 124 CATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGG 65
Query 365145 TCTTAAGACAGG 365156
|| ||||| ||
Sbjct 64 CCTGAAGACGGG 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302931343573652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |