Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4896 123 3e-23 >seq4896 Length=3982 Score = 123 bits (136), Expect = 3e-23 Identities = 366/561 (65%), Gaps = 9/561 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | ||| ||||| || || || | ||| ||| || || | Sbjct 1439 GCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAG 1498 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| || || || ||||| ||| || || Sbjct 1499 GCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 1558 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || ||||| ||||| || || | ||| | ||||| | || || || Sbjct 1559 GATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAA---GGACGAGTTCTTGTC 1615 Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||||| | ||||| ||||| || || ||||| || | || || || || Sbjct 1616 CTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGC 1675 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 ||| || ||||| ||| | | | || ||||| || || || | || || || Sbjct 1676 GTTGAAGAGGTAGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTA 1735 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || |||| |||||||| || ||||| |||||||| |||| || || | Sbjct 1736 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGG 1795 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 |||||| || || |||| ||| || || || || ||||| || || || || || Sbjct 1796 GATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGC 1855 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || || || | || || | || | ||| || | | | | || | Sbjct 1856 AGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTT 1915 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| ||||| || || ||||| | || ||| ||||||| || || || || || Sbjct 1916 CCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 1975 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 1976 CTTCTTGTACATCTGCCAGAT 1996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556684790222640