Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7620 500 2e-136
seq4896 396 5e-105
>seq7620
Length=2775
Score = 500 bits (554), Expect = 2e-136
Identities = 1243/1866 (67%), Gaps = 53/1866 (3%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||| ||||| ||| || |||| |||| || | ||||||||||||||| ||||| || |
Sbjct 6 TGACCTGGAGGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGC 65
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| || | ||||||| || | ||| ||| || | ||
Sbjct 66 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG---------GT 116
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||||||||||||| ||| || | ||||| | || || || |
Sbjct 117 CCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAG 173
Query 243921 CCATGGTGATGAGGTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
|||| ||| | | ||| ||| || ||||| | | |||||||||| || |||||
Sbjct 174 CCATC-TGA--ACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGA 230
Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
| |||||| ||||||||| | || || || | | | |||| || |
Sbjct 231 CCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTT 290
Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCA 244097
|||| ||| ||||||||||| | | || ||| || ||| ||| || |
Sbjct 291 TCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGA 350
Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157
|||| ||||| || | || || ||||||||||||| |||| | || ||||||| ||
Sbjct 351 CCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGC 410
Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217
||| |||||||||| ||||||| || || ||||| ||||| || | | ||||||||
Sbjct 411 ACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGAC 470
Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCG 244277
|||| | | ||||||| || || | ||||| | | ||||||||| | | | |
Sbjct 471 TGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAG 530
Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337
| ||| | || | || ||||||||| ||||| || | |||| | ||||
Sbjct 531 A-AGG-CTTCACATT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 581
Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGG 244396
||||| | |||| | ||||||||| || || |||||||| || | || ||||
Sbjct 582 AGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT-GAGG 640
Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG 244456
|| || | ||||||||||||||||||| |||||| | || || |||| | | |
Sbjct 641 GCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCG 700
Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516
|| || |||| || | ||| | || || || ||||| || || | || ||||||
Sbjct 701 AAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGT 760
Query 244517 CTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACC 244576
| ||||||| ||||| | ||||| | || ||||| ||| ||||||| | |
Sbjct 761 CGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATC 820
Query 244577 TTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCG 244636
|||| |||||||| || | | ||||||| || | ||| ||||| || |
Sbjct 821 CTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---G 877
Query 244637 TAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696
| | ||| ||| | || ||| || || | ||||| | || ||||||
Sbjct 878 CAAGCATCATCGTAGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAGGTTG 928
Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756
||||| || ||||| || | | | ||||| || ||||||||||||||| || ||
Sbjct 929 CAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTA 988
Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816
|||||||||||||| || || ||| |||| ||||||| ||||||||||||||||
Sbjct 989 CGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATG 1048
Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876
||||| ||||||||| ||| || |||||| | | |||||| | | |||||
Sbjct 1049 AAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTC 1108
Query 244877 ACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936
| ||| ||||| |||||||| | ||| || ||| || ||||||||||| |
Sbjct 1109 ATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCG 1168
Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCC 244995
|| || ||| | || ||||||||| || ||| |||||||| |||| || |||
Sbjct 1169 CCATAGCAGTCGGCCAGACCGGGGCAC-TCGTTGGGACACATGAGGGTCCAGTCACCGTT 1227
Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055
| || ||| | || ||||||||| ||||| |||||||| ||| |||| ||||| | ||
Sbjct 1228 CTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGC 1287
Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115
| ||| ||| ||| |||||| | ||| || | || |||||||| || ||||
Sbjct 1288 GCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTG 1347
Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCAT 245175
||||||||| | ||||| || | ||| || || ||||||||||| |||||||| ||
Sbjct 1348 CCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTA 1407
Query 245176 CCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGG 245234
|| | || | |||||||| || || | || | ||||| ||| |||||||
Sbjct 1408 CCGGGC-AGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGG 1466
Query 245235 TGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGG 245294
| || |||||| | ||| || | | || | || | || ||| | || || |
Sbjct 1467 TACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG 1526
Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354
| ||||||||| | ||| ||| |||||| || || || ||||| |||||||||
Sbjct 1527 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCT 1586
Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414
||||||| || ||| ||||| ||||||||||| |||| ||| | | | ||||| |
Sbjct 1587 CTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGA 1646
Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAG 245474
| |||||| ||| ||||| ||| | |||||| | | ||| |||| || | |
Sbjct 1647 GGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACAC 1706
Query 245475 CGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG-CG- 245531
|| || | ||| || ||| | | | | || | ||||| |||||||||| ||
Sbjct 1707 GCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGGACGC 1765
Query 245532 TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCA 245590
|| | || || || |||||| | |||||| ||||| || |||||||| |||
Sbjct 1766 TCAACAATCTTGCCATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCA 1822
Query 245591 AAGTAC 245596
||||||
Sbjct 1823 AAGTAC 1828
>seq4896
Length=3982
Score = 396 bits (438), Expect = 5e-105
Identities = 614/860 (71%), Gaps = 28/860 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| ||
Sbjct 1996 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1937
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || ||| ||| |||| |||| ||| ||
Sbjct 1936 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 1879
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || ||||||||||| |||||||||||||| ||||| |||||||| | |
Sbjct 1878 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 1819
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||||||||||||||| |
Sbjct 1818 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 1759
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| |
Sbjct 1758 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 1702
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| | | || | | || ||||| ||||| ||||| || ||||| ||| |||||||
Sbjct 1701 CAGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGTATCCGCAAGAAGG 1642
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710
| |||||||| || |||||| || | | | || | | || | || | || ||
Sbjct 1641 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 1583
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|||||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct 1582 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 1523
Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || || || ||||| || || ||||| || ||||| |||||| | |||||
Sbjct 1522 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 1464
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888
||| || || | |||||||| |||||||| ||| ||||||| ||| | |||
Sbjct 1463 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 1407
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| || ||| || ||||||||| || ||||| || ||| |||||||||| |
Sbjct 1406 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 1348
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| || | || ||| ||||| ||||||||||| |||||||||| ||||||||
Sbjct 1347 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 1288
Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
||| ||||||||||| ||||| || ||| | || | || | ||||||| |
Sbjct 1287 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 1231
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | |||||||||||||| |||||||
Sbjct 1230 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 1171
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| |||| |||||||||
Sbjct 1170 AGCGTGTCGGTGACTACCAG 1151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944040717987360
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