Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7620 251 9e-62 seq4896 132 6e-26 seq9567 91.5 2e-13 >seq7620 Length=2775 Score = 251 bits (278), Expect = 9e-62 Identities = 973/1509 (64%), Gaps = 51/1509 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604 || ||||| ||||||| || ||| | |||||||| |||| || |||| | | Sbjct 1827 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 1769 Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664 || || ||| ||||| ||||||| || | |||| ||| || || |||||||| Sbjct 1768 TGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGA 1709 Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724 ||| ||||||| ||| || |||||| | | |||| ||| || | || || Sbjct 1708 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCCCCCAC 1649 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 ||||||||| |||||||| || || || ||||| || ||||| | | | || Sbjct 1648 CCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAA 1589 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||||| || | || ||||| | ||||||| |||||| ||||| ||| Sbjct 1588 AGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGAT 1529 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904 ||| ||||||||||| || || |||| || | |||| ||| || || Sbjct 1528 GGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGG 1469 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || ||| || | ||| | | || |||||||| || || ||| ||| || || Sbjct 1468 TACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCG 1409 Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCC 112018 || || |||| | ||| |||| || || | || |||| |||||||| Sbjct 1408 GTACGTCGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCC 1352 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||||| ||| || | ||||||||||| |||| ||||| || | ||||||| Sbjct 1351 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 1292 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || |||||| || ||| |||||||||||||| ||||||||||||||| | || || Sbjct 1291 CCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGA 1232 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197 | ||| || | ||| | ||| | ||||| || || |||||||| |||| ||| Sbjct 1231 GAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTA 1172 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251 | || |||||||| || || || ||| |||||| ||| | | | |||| || Sbjct 1171 T-GGCGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGA 1113 Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311 | || || |||| || | ||| | || || ||| || | || |||||||| | Sbjct 1112 CCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCG 1059 Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371 | | || | ||||| ||||| ||| ||| |||| ||||| || || ||||| ||| Sbjct 1058 GCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 999 Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431 | ||| || ||||| ||||| || || || | || | | | |||||| Sbjct 998 GCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGG 939 Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491 ||||| || ||||| || || | || || || | || || || || | || Sbjct 938 TTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGA 884 Query 112492 CATTTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545 ||| |||| | || | ||||| || || | |||| ||||| | Sbjct 883 TGCTTG-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGA 825 Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 112605 |||| |||| || || ||||| ||| | ||||| || || ||| ||| Sbjct 824 ACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGAC 765 Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCAC 112664 |||| || |||||| | |||||||| ||||| || |||| ||| || || || || || Sbjct 764 ACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CAT 707 Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 || ||| || || ||| || || |||| || || || ||||| || || || Sbjct 706 GCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 647 Query 112724 CGCCGCTCTTGAGGCGAGTTCGG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780 || || || || ||||| || |||| ||| || ||||| || ||||| Sbjct 646 TGCTGCCCTCACTGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTT 590 Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 112840 |||| ||||| || || | || | || || || || |||| |||| |||| | | Sbjct 589 CAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCT 532 Query 112841 GCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898 || | || |||||||| |||| ||| | |||||||| | || |||| ||| Sbjct 531 TCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAAC 472 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 ||||| || | || || ||||| || ||| || | || ||| |||| || || || Sbjct 471 AGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAG 412 Query 112959 TGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 113018 ||||| || || ||||| | |||||||| | | | | |||||| || ||||| | Sbjct 411 TGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAG 352 Query 113019 ATTGTCAAC 113027 | |||||| Sbjct 351 GTCGTCAAC 343 >seq4896 Length=3982 Score = 132 bits (146), Expect = 6e-26 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106 ||||| |||| || || ||||| ||| | | ||| | | ||||| | ||||| | Sbjct 1726 CTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 1668 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165 || | || ||||| | ||||| || || ||||| || ||| | | |||| Sbjct 1667 GACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 1608 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| | Sbjct 1607 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 1549 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || |||| | | || | |||||||||||||| || |||||||| || || ||| | Sbjct 1548 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 1489 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1488 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1443 >seq9567 Length=2195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 302/461 (66%), Gaps = 18/461 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 |||||||| || || || || | | || | || || ||||| | || || || || Sbjct 1635 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTGGTACCG 1576 Query 15945 GCGATGACAACAATACCTGTTTC--GTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | ||| |||| |||| | | | | | ||||| |||||||| |||| || ||||| Sbjct 1575 GCCAGGACGACAA--CCTGCTCCCGGGTGTTGAAACCGTCCATCTCGGTCAGAATCTGGT 1518 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC---GTTGCTTTC 16059 | | ||| ||||| || || || | | ||| | |||| || || || Sbjct 1517 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAAACCCCGGCCACTCTCCTGTCGCGCTC 1458 Query 16060 ---CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTT 16116 | | ||| || |||||||| || |||| |||||| || || | || | | Sbjct 1457 GACCAATGGCGTCGATCTCATCGATAAAGATGATGCAAGGAGCGTTCTTACGGCCTTCGG 1398 Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176 | || || || || ||||| | || ||||||||||||||||| || || | | Sbjct 1397 CGAACAGGTCTCGCACACGGGAAGGACCAACACCAACAAACATCTCGACGAATTCAGAAC 1338 Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235 || ||| || | ||||||||| ||| || || || | || |||||| | ||| Sbjct 1337 CGCTCACACTGAA-GAAGGGGACTCCAGACTCGCCAGCTGTAGCCTTGGCGAGCAATGTC 1279 Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 16293 ||||||||||| || || || || | ||| ||||| ||||||||||| || |||| Sbjct 1278 TTACCCGTACCAGGGGGGCCAGCCAGAATGGCTCCTCGGGGAATCTTGGCACCGAGCTTC 1219 Query 16294 -CAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 |||| | |||| || ||||| || || ||||| ||| Sbjct 1218 TCAAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTC 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620546198845920