Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7620 455 6e-123 seq4896 206 5e-48 >seq7620 Length=2775 Score = 455 bits (504), Expect = 6e-123 Identities = 1243/1870 (66%), Gaps = 94/1870 (5%) Strand=Plus/Plus Query 212568 GGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCC 212624 ||| |||| ||||||| || || || ||||||||||| ||||| ||||| ||| | Sbjct 17 GGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTT---C 73 Query 212625 CAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTG 212683 |||||| | |||||| |||| ||| |||| | || | |||| | | ||| Sbjct 74 CAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTGGGGTCCTTCATGTG 126 Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743 | | ||| |||||||| ||| || ||||| | | | ||| || ||||| Sbjct 127 G---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCAT 177 Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803 | | || | | ||| || | |||||| ||||||||| ||| | |||| || | Sbjct 178 CTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGC 237 Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CA 212859 |||| | |||||||||||| | || || || | | | || | | | | || Sbjct 238 GGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCA 293 Query 212860 TGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCT 212919 || | || ||| |||||| || | ||| ||||| ||| |||||||| | || Sbjct 294 TGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCT 353 Query 212920 GGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCT 212979 |||| || || | ||| || | | |||||| | ||| || ||||| ||||||| || || Sbjct 354 GGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACT 413 Query 212980 CGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGT 213039 ||||||| ||||| ||||| | ||| ||||| || ||||| || || | ||| ||||||| Sbjct 414 CGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGT 473 Query 213040 TCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGAC 213098 | | | |||||||| || | || || | ||| |||||||||| | |||| Sbjct 474 TGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCT-CCCAGTCCCAGAGGTCAGA- 531 Query 213099 AGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGG 213154 ||| |||||| ||||||||||| ||||| | || || |||| |||| Sbjct 532 AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGG 579 Query 213155 GCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCA 213213 ||||| | | | ||||||||| || | |||||||||||||| ||| || || | Sbjct 580 AGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGA 638 Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273 ||||||| | ||||||||| || || |||| | ||||||||| ||||| || ||| Sbjct 639 GGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACT 698 Query 213274 TGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGG 213333 ||| ||||| || |||| ||||||| || |||||||| || | || |||| Sbjct 699 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGG 758 Query 213334 GTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATG 213392 ||| ||||| || ||| ||| |||| ||| | ||||| ||| |||||| Sbjct 759 GTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATA 817 Query 213393 ATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAAC 213452 ||| |||| |||||||| | | || | ||||| | | || ||| || ||| Sbjct 818 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAG 871 Query 213453 ACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAA 213506 | |||| | ||| | | ||| ||||||||| | || |||||||| Sbjct 872 TCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAG 931 Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566 || || ||||| | || | | |||||| || ||||||||||| || ||| || ||| Sbjct 932 ACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGG 991 Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTA 213625 |||||||||||||||| ||| ||| ||||| | |||| ||||||||||||||| | Sbjct 992 ATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 1050 Query 213626 GGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTG 213683 |||| |||||||| ||| | | | || | |||| |||||| | | |||||| Sbjct 1051 GGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT- 1107 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743 || | || | | | || ||| |||| |||||| || | | ||| || Sbjct 1108 --CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCC 1165 Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803 | ||| || | |||| || || || ||||||||||||| ||||||| ||| Sbjct 1166 TCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCG 1225 Query 213804 -TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862 || |||| ||| | || |||||| || || || | ||| || || ||||||||| | Sbjct 1226 TTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCG 1284 Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922 || | ||| ||| || ||| |||||||| || || || ||||||| || || Sbjct 1285 GGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGC 1344 Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979 |||||| ||||| | ||||||||||||||| || | || | ||||| |||||||| || Sbjct 1345 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGAC 1404 Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039 || ||| ||||||||| || || | ||| | |||||||| ||||| Sbjct 1405 GTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTT 1464 Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCC 214096 ||| || || || || ||||| | ||| | | ||| | | | || || || || Sbjct 1465 GGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACC 1521 Query 214097 ACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCT 214156 ||| || ||||||||||||||| ||| | | | ||| || || || | ||||| Sbjct 1522 ACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCT 1581 Query 214157 GTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTT 214216 ||| ||| | | || | || |||||| || ||||| ||| || | |||| || Sbjct 1582 GTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATT 1641 Query 214217 GAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAG 214276 ||| || |||||| ||||||| | | || ||| | || | || ||||||||||||| Sbjct 1642 GAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAG 1701 Query 214277 GACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGG 214335 ||| || |||| ||| | || | || | ||| | ||||||||||| Sbjct 1702 GACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGG 1760 Query 214336 GCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGA 214392 | | ||| | || ||| | |||||| |||||||| ||||| |||||||||| Sbjct 1761 GACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGA 1817 Query 214393 ACCCAAAGTA 214402 | |||||||| Sbjct 1818 AGCCAAAGTA 1827 >seq4896 Length=3982 Score = 206 bits (228), Expect = 5e-48 Identities = 487/729 (67%), Gaps = 11/729 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1151 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1210 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 1211 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 1269 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | |||| Sbjct 1270 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 1329 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| || || ||||||| ||| || ||||| || | || | Sbjct 1330 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 1389 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | ||| |||| Sbjct 1390 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 1446 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || ||||| || ||||||| ||||||| ||| || ||||||| Sbjct 1447 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 1506 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | || ||||||||| |||| Sbjct 1507 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 1566 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| ||| | || | || || | ||||||||| |||||| Sbjct 1567 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 1626 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| ||| || || || ||||| ||||| |||||| | Sbjct 1627 GGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGT 1686 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | | | ||| ||| | ||||| | |||| ||| | ||| |||| | Sbjct 1687 AGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 1743 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | |||||| | ||| | Sbjct 1744 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 1803 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | || ||||| ||||| || || || || ||||| |||| Sbjct 1804 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 1863 Query 48555 AGGCAAGGA 48563 |||| |||| Sbjct 1864 AGGCGAGGA 1872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931238365770240