Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq7620 455 6e-123
seq4896 206 5e-48
>seq7620
Length=2775
Score = 455 bits (504), Expect = 6e-123
Identities = 1243/1870 (66%), Gaps = 94/1870 (5%)
Strand=Plus/Plus
Query 212568 GGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCC 212624
||| |||| ||||||| || || || ||||||||||| ||||| ||||| ||| |
Sbjct 17 GGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTT---C 73
Query 212625 CAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTG 212683
|||||| | |||||| |||| ||| |||| | || | |||| | | |||
Sbjct 74 CAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTGGGGTCCTTCATGTG 126
Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743
| | ||| |||||||| ||| || ||||| | | | ||| || |||||
Sbjct 127 G---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCAT 177
Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803
| | || | | ||| || | |||||| ||||||||| ||| | |||| || |
Sbjct 178 CTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGC 237
Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CA 212859
|||| | |||||||||||| | || || || | | | || | | | | ||
Sbjct 238 GGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCA 293
Query 212860 TGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCT 212919
|| | || ||| |||||| || | ||| ||||| ||| |||||||| | ||
Sbjct 294 TGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCT 353
Query 212920 GGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCT 212979
|||| || || | ||| || | | |||||| | ||| || ||||| ||||||| || ||
Sbjct 354 GGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACT 413
Query 212980 CGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGT 213039
||||||| ||||| ||||| | ||| ||||| || ||||| || || | ||| |||||||
Sbjct 414 CGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGT 473
Query 213040 TCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGAC 213098
| | | |||||||| || | || || | ||| |||||||||| | ||||
Sbjct 474 TGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCT-CCCAGTCCCAGAGGTCAGA- 531
Query 213099 AGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGG 213154
||| |||||| ||||||||||| ||||| | || || |||| ||||
Sbjct 532 AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGG 579
Query 213155 GCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCA 213213
||||| | | | ||||||||| || | |||||||||||||| ||| || || |
Sbjct 580 AGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGA 638
Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273
||||||| | ||||||||| || || |||| | ||||||||| ||||| || |||
Sbjct 639 GGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACT 698
Query 213274 TGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGG 213333
||| ||||| || |||| ||||||| || |||||||| || | || ||||
Sbjct 699 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGG 758
Query 213334 GTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATG 213392
||| ||||| || ||| ||| |||| ||| | ||||| ||| ||||||
Sbjct 759 GTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATA 817
Query 213393 ATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAAC 213452
||| |||| |||||||| | | || | ||||| | | || ||| || |||
Sbjct 818 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAG 871
Query 213453 ACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAA 213506
| |||| | ||| | | ||| ||||||||| | || ||||||||
Sbjct 872 TCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAG 931
Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
|| || ||||| | || | | |||||| || ||||||||||| || ||| || |||
Sbjct 932 ACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGG 991
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTA 213625
|||||||||||||||| ||| ||| ||||| | |||| ||||||||||||||| |
Sbjct 992 ATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 1050
Query 213626 GGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTG 213683
|||| |||||||| ||| | | | || | |||| |||||| | | ||||||
Sbjct 1051 GGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT- 1107
Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743
|| | || | | | || ||| |||| |||||| || | | ||| ||
Sbjct 1108 --CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCC 1165
Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
| ||| || | |||| || || || ||||||||||||| ||||||| |||
Sbjct 1166 TCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCG 1225
Query 213804 -TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862
|| |||| ||| | || |||||| || || || | ||| || || ||||||||| |
Sbjct 1226 TTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCG 1284
Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922
|| | ||| ||| || ||| |||||||| || || || ||||||| || ||
Sbjct 1285 GGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGC 1344
Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979
|||||| ||||| | ||||||||||||||| || | || | ||||| |||||||| ||
Sbjct 1345 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGAC 1404
Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039
|| ||| ||||||||| || || | ||| | |||||||| |||||
Sbjct 1405 GTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTT 1464
Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCC 214096
||| || || || || ||||| | ||| | | ||| | | | || || || ||
Sbjct 1465 GGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACC 1521
Query 214097 ACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCT 214156
||| || ||||||||||||||| ||| | | | ||| || || || | |||||
Sbjct 1522 ACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCT 1581
Query 214157 GTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTT 214216
||| ||| | | || | || |||||| || ||||| ||| || | |||| ||
Sbjct 1582 GTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATT 1641
Query 214217 GAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAG 214276
||| || |||||| ||||||| | | || ||| | || | || |||||||||||||
Sbjct 1642 GAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAG 1701
Query 214277 GACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGG 214335
||| || |||| ||| | || | || | ||| | |||||||||||
Sbjct 1702 GACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGG 1760
Query 214336 GCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGA 214392
| | ||| | || ||| | |||||| |||||||| ||||| ||||||||||
Sbjct 1761 GACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGA 1817
Query 214393 ACCCAAAGTA 214402
| ||||||||
Sbjct 1818 AGCCAAAGTA 1827
>seq4896
Length=3982
Score = 206 bits (228), Expect = 5e-48
Identities = 487/729 (67%), Gaps = 11/729 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 1151 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1210
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 1211 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 1269
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||||||| | ||||||||| | ||||
Sbjct 1270 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 1329
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | |||| || || ||||||| ||| || ||||| || | || |
Sbjct 1330 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 1389
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||| ||||
Sbjct 1390 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 1446
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || ||||| || ||||||| ||||||| ||| || |||||||
Sbjct 1447 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 1506
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | || ||||||||| ||||
Sbjct 1507 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 1566
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| ||| | || | || || | ||||||||| ||||||
Sbjct 1567 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 1626
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| ||| || || || ||||| ||||| |||||| |
Sbjct 1627 GGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGT 1686
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | ||| ||| | ||||| | |||| ||| | ||| |||| |
Sbjct 1687 AGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 1743
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | |||||| | ||| |
Sbjct 1744 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 1803
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | || ||||| ||||| || || || || ||||| ||||
Sbjct 1804 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 1863
Query 48555 AGGCAAGGA 48563
|||| ||||
Sbjct 1864 AGGCGAGGA 1872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931238365770240
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