Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7620 271 1e-67
seq4896 199 7e-46
>seq7620
Length=2775
Score = 271 bits (300), Expect = 1e-67
Identities = 846/1280 (66%), Gaps = 51/1280 (4%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| |||||||| |||||||||||||| |||||| ||||||||| ||| | ||||||||
Sbjct 635 GTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 693
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
||| ||| ||||| ||||| | | ||||| | || || || ||||| || || | |
Sbjct 694 AGACTCGAAAGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGACCCTGGACACCAACA 751
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||||| | ||||| | ||| ||||| | || || || ||| |
Sbjct 752 CCAATGGGTCGGTGTCGCATGTTGCTGTTGCGA--GCTTCCGTAACAGGGTAGTGGTTCA 809
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
||||||| | |||| ||||| || || || | || ||| || |||||||
Sbjct 810 CGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGA 869
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
| | | ||| | | |||| || | | || || || ||||| |
Sbjct 870 AGTC--ATAGCAAG----CATCATCGT--AGTTGATGAACGAAGGC----AGGGCCAGAG 917
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
|| ||||| || || || ||||| || | | |||| || ||||| || ||||
Sbjct 918 AAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGA 977
Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCC 221830
| ||| || |||||| ||||||| || || || |||||| ||| ||| | |||
Sbjct 978 GATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCC 1036
Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890
||||||||||| ||||| ||| ||||| ||| ||| | || || | ||||||
Sbjct 1037 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGC 1096
Query 221891 TCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCG---GTCTTTTCATACCCG--GTAT 221945
| ||||| || | | ||||| ||||| | | ||| |||||| |||
Sbjct 1097 T-TCTGGGCCTT--CATGGTCTTGCG---ACCCTTGCCCGCCTTCTCATACTTTTCGTAA 1150
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005
||||| | | |||| || || || ||| |||| || || ||| | ||||||||
Sbjct 1151 AGAGCCT--CGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACA 1208
Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065
| || |||||| ||| | | ||| | || ||||||||| || || ||||| || |
Sbjct 1209 TGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAG 1268
Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125
|| | || || || | || || ||||||| ||||| ||| || | ||| || | |
Sbjct 1269 CCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGA 1328
Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185
||||||| | || |||||||| ||||| || |||| ||| | || || ||||||||||
Sbjct 1329 ACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGT 1388
Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244
|||||||||| || | | | | ||| | |||||||| ||||| | || |
Sbjct 1389 TGCCACCCTGGTCGA-CGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACA 1447
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG 222302
|||||||| ||||||||| || ||||| | || ||| | || | | |||
Sbjct 1448 CCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCAC---GGATTCGGTGG 1504
Query 222303 -CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361
| || |||||||||||| || || ||||||||||| ||| |||||||||| ||
Sbjct 1505 ACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCA 1564
Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421
|| ||||| || |||||| || | || | ||| || || || |||| |||||
Sbjct 1565 TAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGC 1624
Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481
| || | || || || || || ||||| ||| || || ||| | || ||||||
Sbjct 1625 TGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATC 1684
Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCT 222540
|| | ||| ||||| | ||| | | || | ||| ||| || | | | | || |
Sbjct 1685 AGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CG 1743
Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAGGTACGAT 222598
|||| ||||| |||||| | ||| ||| | | | | | | ||| ||||| |||
Sbjct 1744 CATGATCATGTGCTGGGGACGCTCAACA--ATCTTGCCATCAATCTTGAGGAGGTAGGAT 1801
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658
|| ||||||||||| |||||||| | | | ||||| | | | | || | |||
Sbjct 1802 CGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGCC 1861
Query 222659 GCGTCCAGCTCCGACTTGTG 222678
| ||| |||||| ||||||
Sbjct 1862 GAGTCTAGCTCCTCCTTGTG 1881
Score = 104 bits (114), Expect = 4e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | ||
Sbjct 343 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 402
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||||||||| | || ||||| || ||||| || || |
Sbjct 403 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAG 462
Query 221236 CAGCAGACTGTTGCG 221250
|||||||||||||||
Sbjct 463 CAGCAGACTGTTGCG 477
>seq4896
Length=3982
Score = 199 bits (220), Expect = 7e-46
Identities = 559/857 (65%), Gaps = 24/857 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| |||||| ||||| |||||||||||
Sbjct 1996 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 1937
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || | ||||||||| || ||
Sbjct 1936 TCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGACGAGCAGTTCTTCGTCTC 1878
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||| || || || |||||||| || |||| |
Sbjct 1877 CCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGCG 1818
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | | || || ||| | |||||| || |||||||| |||||||| ||
Sbjct 1817 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 1758
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769
|| || | ||||| ||| || | ||| || || || ||||| | ||
Sbjct 1757 GGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGCC 1701
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|| | || || || ||||| ||| ||| ||| | ||| | ||||||
Sbjct 1700 AGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGTATCCGCAAGAAGGC 1641
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
|||||||| |||||| | | ||| | | | |||| |||| || || ||
Sbjct 1640 CGACTGGGCCATCCGATGGATCCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTCGC 1581
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
||||||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||
Sbjct 1580 CTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 1521
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || |||||| || ||| ||||||||||||||||||| | ||||||||
Sbjct 1520 GAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGG 1461
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC--T 26067
||| |||| || ||||| ||||| ||| || | |||| ||| | | | |
Sbjct 1460 TCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCAC---CTCAAGGGCCGTGCCAG 1407
Query 26068 CAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126
|||| || | || | ||||||| || || || || ||| ||||||| |
Sbjct 1406 CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGAC 1347
Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186
| ||||||||| | ||||||| || ||||| ||
Sbjct 1346 CGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGA 1287
Query 26187 GTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244
|| || ||||||| || || || ||| || || || | |||||| | |
Sbjct 1286 GTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAGGTCTACAAGGCCACC 1229
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
||||| |||||||| ||||| ||||| || | | || |||||||||||||| || |||
Sbjct 1228 AACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAG 1169
Query 26305 AGGGTCGGCGACTATCA 26321
| ||||| ||||| ||
Sbjct 1168 CGTGTCGGTGACTACCA 1152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928551215379840
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