Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq11361 98.7 1e-15 >seq11361 Length=2556 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 ||||||| || || || || || || || ||||||||||| ||||| || || |||| | Sbjct 1219 CAGACATGTTGGCCAGAAGAGCCTGGGCAGTGCAGATGTTGCTGGTGGCCTTTTCTCGGC 1160 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413 ||| |||||||| | || || || || | | | ||||| || || || |||| Sbjct 1159 GAATGTGCTGCTCACGGGTCTGGAGGGCGAGACGGAGGGCAGGCTTACCGAGGCGGTCCT 1100 Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGA 139473 || ||| |||| | ||| || ||||| | ||| ||||| || | || || |||| Sbjct 1099 TGGAGACACCGACAAGACGGCCGGGGATCTTGCGCTTGTACTTCTCCGAGGTGGCGAAGA 1040 Query 139474 ATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 | || || ||||| || ||||| |||| ||| | ||| Sbjct 1039 AGGCGGCGTGAGGGCCACCGTAGCCCAGAGGCACACC 1003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578815393080720