Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4896 147 6e-30 seq3847 132 1e-25 seq7620 116 1e-20 seq2402 87.8 5e-12 >seq4896 Length=3982 Score = 147 bits (162), Expect = 6e-30 Identities = 248/354 (70%), Gaps = 4/354 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| ||||| ||| || || | ||||| |||||| || ||||| || || | Sbjct 1794 CCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 1735 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | || || ||||| || |||||||| || | | || | | || || | |||||| Sbjct 1734 ACTCGCTCCTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAAC 1676 Query 133424 GCCATTAGCGAATTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482 |||||| | || ||| ||||| ||||| | |||||||| || ||||||||| Sbjct 1675 GCCATT-GAGACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCA 1617 Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542 ||||||| || |||||| |||||||| || ||||||| || ||||| || || Sbjct 1616 GGACAAGAACTCGTCCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTT 1557 Query 133543 tttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602 ||||| ||||| || ||| || || ||||| || |||||||| | | ||||| || Sbjct 1556 CTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCT 1497 Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | ||||| ||||| || || || | ||||||| ||||||||||| ||||| Sbjct 1496 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1443 >seq3847 Length=5167 Score = 132 bits (146), Expect = 1e-25 Identities = 193/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||| | | ||||| | || |||||||| ||||| || | || || || || Sbjct 2038 GTCTTCAAGAGCCTTGACCAGTCGTCGCTGAATGTAACCCGTCTCGGCGGTCTTGACCGC 2097 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 |||||||| ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 2098 GGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGGAAGGAGTGAG 2157 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | | ||| |||| ||||||||||| || |||||||| | ||| |||||| Sbjct 2158 ACCACGAAGATACGAGTTCTCGACGAAACCACGGGCTTCGGGCGAGTAATCGTCCTTGGT 2217 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || ||||| || | || || | ||| | || |||||||| || || ||| |||| Sbjct 2218 GAAATGAGGCAGCGTGCGGTACTTGAATCCGAAGGGAATACGCTTGCCTTCGACGATCTG 2277 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| | | | ||||||||||||| || Sbjct 2278 CTGTCCGACAAGGGCAGTCATCTGCGAAATGTT 2310 >seq7620 Length=2775 Score = 116 bits (128), Expect = 1e-20 Identities = 564/885 (64%), Gaps = 19/885 (2%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||| ||| || | |||||| ||| || || || || ||||||||| | ||||||| Sbjct 951 CGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCT 1010 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || | ||| || |||||||| || ||| | ||| | || ||||| ||| Sbjct 1011 GGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCT 1070 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805 | || || || || |||||| | |||| || || |||| |||| Sbjct 1071 GCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTGCCCG 1130 Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863 || |||||| |||| || | ||| | | | ||||| || || || || ||| || Sbjct 1131 CCTTCTCATACTTTTCGTAAAGAGCCTC--GAACTCCTCGCCATAGCAGTCGGCCAGACC 1188 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCAT 155920 ||||||| | ||| || | || | ||| | || || ||| |||||| ||| Sbjct 1189 GGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGA---CACGCTTCAT 1245 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980 || | ||| ||| | ||| ||| ||||| | || |||||| | ||| Sbjct 1246 GAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCC 1305 Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040 ||| ||||| || || || | ||| || | ||| | || ||||| || || || Sbjct 1306 GTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGAT 1365 Query 156041 AGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097 ||||| |||| | |||| |||||||| || || ||||| ||||| || ||||| Sbjct 1366 GGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAA 1425 Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAAC 156156 ||||| ||||| || | | ||| ||||| || || ||||| || ||| || | || | Sbjct 1426 GACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCG-ATGTAAGAGC 1484 Query 156157 CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGA 156215 ||| | || | || | | || || |||||||| | |||| || || || Sbjct 1485 CAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG-CCATCTTGGAGATCATG 1543 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || ||| | ||||| ||||||| ||||| || |||| ||| | || Sbjct 1544 GCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGG 1603 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 |||| || | ||||| | || || ||||| ||||| || || || | ||||| Sbjct 1604 AAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGG 1663 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGACCC 156394 | || | || | ||||| | ||| |||||| | ||||| || |||| Sbjct 1664 GTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCC 1723 Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454 | || | || ||| || | ||| ||| ||||| |||||||| |||||| ||||| Sbjct 1724 CAG-ATGCCGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATC 1782 Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| || ||||| | || || ||||| || || || || || Sbjct 1783 AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTA 1827 >seq2402 Length=6404 Score = 87.8 bits (96), Expect = 5e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAA-GCGAGA 251483 || || ||||| | | | ||||| || | ||| | || || ||||| ||| ||| | Sbjct 5430 CAGACGTGGACTCGGAAGGCATCCGACACCTCAAACAGACGCTCCTTGAGGAAAGCGGCA 5371 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 || ||||| | |||||| |||||||| ||||| || ||||| || ||||||||||| || Sbjct 5370 -GCTCCGTGGGCAATCATGCAATCACGTTCCATCTCTCCGAATCGCAGACCACCATCTCG 5312 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGT 251570 || | ||| ||| | ||||| ||||| Sbjct 5311 GGCACGACCTTCGACGGGCTGGCGAGT 5285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471340765133382