Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7620 315 7e-81 seq4896 152 5e-32 seq1688 131 2e-25 seq9298 116 4e-21 seq2806 114 1e-20 >seq7620 Length=2775 Score = 315 bits (348), Expect = 7e-81 Identities = 1135/1751 (65%), Gaps = 51/1751 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109 |||||| ||| |||||||| || || ||||| || ||||| | || || | |||| Sbjct 137 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTG- 195 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || ||||| | |||| ||| | |||| Sbjct 196 --CGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATG 253 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | |||| | ||| Sbjct 254 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCC 313 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || ||| | | || || ||||| |||||||| ||||| || Sbjct 314 ATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 373 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || ||||||||||||||| |||||| Sbjct 374 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 433 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || | || || ||||| || | |||||| |||||| | ||| | | || Sbjct 434 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 493 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 | | | | || | ||||||||||||| || || |||| |||||||||||| Sbjct 494 ACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCG 553 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 |||| ||||| || ||||| ||||| | | | | ||| || || | | || Sbjct 554 AACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCC 613 Query 148530 GCCGCCAGTTCGCAGCTC-GCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 ||||| | ||| | || ||| || | | ||| || |||||| || ||| | Sbjct 614 TTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTT 672 Query 148589 GTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 ||||||| | ||| | | | | ||| | ||||| ||||| | || || | Sbjct 673 GTTGAGCTCACGAGCCTCGGGAGAC----TCGAAAGGCATGCGCAGAGCAAGGAAAGCAT 728 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| ||||| || || || |||||||| |||||| |||||| | ||| || Sbjct 729 CAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTT 788 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764 | | || |||||||| |||||| ||| ||| || ||||| || || |||| || Sbjct 789 CCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTG 848 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TAC--GATGCATCGGTTCA 148818 | | | ||| | | || || || | | ||||| || |||| | || Sbjct 849 TGACGTCGTGCAACTTCTGGAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCA 908 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 ||| | ||| || || ||||| || || |||||| ||||||| |||||| | |||| Sbjct 909 GGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCT 968 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 ||| ||| |||||| || ||| ||||| |||||| || |||||||||| ||||| Sbjct 969 CGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 1028 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AA 148996 | ||||||||| |||||| | || ||| || || ||||| || | ||| | Sbjct 1029 AGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCAT 1088 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTA 149050 | | || | ||| || ||| || || | |||||||| ||| ||| || Sbjct 1089 ACCAG--AGCTTCTGGGC-----CTTCATGGTCTT-GCGACCCTTGCCCGCCTTCTCATA 1140 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | |||| |||||| ||||||| ||||| ||| | ||||||||||||| | Sbjct 1141 CTTTTCGTAAAGAGCC--TCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCG 1198 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | || |||||||| | ||| | |||| | | || |||||||| || |||||||| Sbjct 1199 TTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 1258 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | |||||| || | |||||||| || | || || ||| ||| |||| Sbjct 1259 ATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 1318 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 |||| || | || | || |||||||| ||||||| ||| | || | || || Sbjct 1319 AGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 1378 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| ||||||||||||| || | ||||||| || || |||| ||| Sbjct 1379 GGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATG 1438 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404 || | || ||| || ||||| ||| ||| ||| | ||| || || | Sbjct 1439 GGGGTGACACCGTTGGAGGTACCGTTGGTACCAGC-GATGTAAGAGCCAGTGGCACGGAT 1497 Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463 | ||| ||||| | |||||| || ||||| | ||| ||||| || ||| || Sbjct 1498 TCGGTGGACGTTCAGGCCGATACCACCCGCCAT-CTTGGAGATCATGGCACAGGTCTTGA 1556 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 | || || || ||||| |||||||| |||||| | ||| ||||| ||| ||| Sbjct 1557 GAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACA 1616 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT-C 149582 || || | || || || ||| | ||||||| ||| || || || |||| | Sbjct 1617 GCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGC 1676 Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642 | | ||||| | ||| | ||| || || || || || || || || |||||| | Sbjct 1677 TCG-ACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACA 1735 Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702 | || ||||| | ||| ||||| || ||||| | | ||| |||| ||||| | | Sbjct 1736 GACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGG 1795 Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCA 149762 ||| || || |||||| |||||||||||| ||| | ||||| ||| | | | || Sbjct 1796 TAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACA 1855 Query 149763 ATGGCGGCGTC 149773 ||||| | ||| Sbjct 1856 ATGGCCGAGTC 1866 >seq4896 Length=3982 Score = 152 bits (168), Expect = 5e-32 Identities = 343/511 (67%), Gaps = 17/511 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 1151 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 1210 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || || ||| | ||| | ||||| || Sbjct 1211 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAG 1270 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||| ||||||| |||| | ||||||||||| |||| || Sbjct 1271 GCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGC 1330 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | ||| || | ||||||| ||||||| || || || ||| ||| | Sbjct 1331 GCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTC 1390 Query 120591 GAGCATAG------TG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 | || || |||| ||| |||| | | | | || | || | ||| Sbjct 1391 CTGGATGACCTGCTTGCTGGCACGGCC-CTTGAGGTGG----GAGT---GGAGGA--GGC 1440 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| ||||| || |||||||| || || || ||||||||| ||| ||||||| Sbjct 1441 ATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 1500 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||||| ||| | |||||| |||| |||| ||||||| || ||||| | Sbjct 1501 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 1560 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 ||||| ||| ||||||||||| | |||| || || | || ||||| | || Sbjct 1561 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGA 1620 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCG 120854 |||| |||||||| |||||||| ||||| Sbjct 1621 TCCATCGGATGGCCCAGTCGGCCTTCTTGCG 1651 >seq1688 Length=7796 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 5231 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 5289 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 5290 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 5349 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || || || || | Sbjct 5350 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGG 5409 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 5410 TCTTGACAAAGATCTGCAT 5428 >seq9298 Length=1639 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || |||||||| |||||| Sbjct 310 TCCTCCAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 251 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 250 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 191 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 190 GTCTTGCCCGTCAGGGTCTTCACGAAA 164 >seq2806 Length=5600 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| |||| | || || || |||||||||||||||| Sbjct 1548 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 1491 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| || || ||||| |||||||||||||| |||||| | Sbjct 1490 CGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATT 1431 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||||| || | ||||| || || ||||| || | Sbjct 1430 TCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTCTTTCCGGTGAGGG 1371 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 1370 TCTTGACGAAGATCTGCAT 1352 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| ||| | | || | | | ||||| ||||||||||| Sbjct 1320 GTTGACTCCTTCTGAATATTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 1262 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||| || || ||||| || |||||| ||| Sbjct 1261 GGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTT 1202 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| |||| ||||| || || || || || || Sbjct 1201 GACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGT 1142 Query 133643 TTTTACGA 133650 || |||| Sbjct 1141 CTTGACGA 1134 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||||||| | ||| | | | ||||| |||||||||| Sbjct 1046 GGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCAAGCTGCTTGC 988 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 987 CGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACT 928 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || || | || ||| || |||| ||| | ||| ||||| |||| Sbjct 927 TGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGTCA 871 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| ||| || ||| ||| ||| || |||| Sbjct 1783 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCTTCCAGCT 1725 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || ||||||||||| || |||||||| |||||||| |||| Sbjct 1724 GCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCT 1665 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| || ||| | | ||| || || | |||| ||| || || | Sbjct 1664 TGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGTGATGGTCTTTCCAG 1605 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || || |||||||| Sbjct 1604 TGAGAGTCTTGACAAAGATCTGCAT 1580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483268002770640