Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2806 105 4e-18
>seq2806
Length=5600
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||| || ||||| ||| || || |||||||| |||
Sbjct 1579 ACCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 1520
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || |||| || | || || |||||||| || | ||||| ||||| | ||
Sbjct 1519 GAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGG 1460
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||||| ||||| || ||| ||||| ||| |||| ||||||| |||||||
Sbjct 1459 AATGCCTTCCTTGTCCTGGATCTTCGATTTCA-CATTGTCAATGGTGTCGGACGATTCCA 1401
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| ||||| || || || || | || || || ||||||||||||
Sbjct 1400 CCTCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCATA 1351
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
||| || || |||||||| ||||| || ||||| |||| |||| || || || |||||
Sbjct 1771 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAA 1712
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
|| | |||||||| || | || | || || ||||| ||| || |||| | |
Sbjct 1711 GATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTCA-CGT 1653
Query 33678 AGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
|||| ||| ||||| || || || || | ||||| || || || || | || || |
Sbjct 1652 TGTCAATGGTATCGCTCGACTCGACCTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGA 1593
Query 33737 CAAAGATCTGCATA 33750
||||||||||||||
Sbjct 1592 CAAAGATCTGCATA 1579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328602702261120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |