Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7620 188 9e-43 seq4896 145 9e-30 >seq7620 Length=2775 Score = 188 bits (208), Expect = 9e-43 Identities = 1105/1753 (63%), Gaps = 43/1753 (2%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| | ||| ||||||||||| |||||||| || || |||||||| | | ||| Sbjct 29 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 88 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | |||| | ||| || | |||| || ||| | ||||| ||| Sbjct 89 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGA 148 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 118007 || |||||| || || || || ||||| | || || | | | || ||||| Sbjct 149 TCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAG 208 Query 118008 ACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCA 118067 || ||| |||||||| ||| | || | ||||| | ||| || |||||||| | Sbjct 209 ACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGA---A 265 Query 118068 CCCGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGA 118124 || || | | |||| | | ||||| | | ||||| || || || | || Sbjct 266 CCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGG 325 Query 118125 TCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAG 118184 |||| | || ||||| || ||||| || |||||| || | | | ||| Sbjct 326 TCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAG 385 Query 118185 ATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCT 118244 || |||| ||||| ||||| |||||||| ||||| |||| ||| || | || ||| Sbjct 386 ATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCA 445 Query 118245 GTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTG 118304 || ||||| || || | || || ||||| || | || | ||| | | | ||| || Sbjct 446 GTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTG 505 Query 118305 AGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 118364 || |||||||| || | | || | | | |||||| || |||||||| ||| Sbjct 506 AGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATA 565 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | || || || || |||| || || || || ||||| ||| |||| | | Sbjct 566 CCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-G 624 Query 118425 GAGCTC-GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | || |||||| || || || || || || || || | || | | Sbjct 625 CACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACG 684 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGA 118542 |||||| || || || | | || || | || || |||| || ||||| |||| Sbjct 685 AGCCTCGGGAGACTCGAAAGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGA 743 Query 118543 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAA 118602 |||| | ||||| || || |||| ||| || || ||||| | || || || Sbjct 744 CACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGT 803 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 ||| ||||||| ||| || || || |||||||| ||||| || || | || Sbjct 804 GGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACT 863 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACG 118719 | | | | ||| | || || || || | ||| || ||| ||||| | || | Sbjct 864 TCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAG 920 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | || || || |||| |||||| | |||||| ||||| || ||||| | | Sbjct 921 CAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGAT 980 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || || |||||||||| |||||| || || ||| ||| || ||||||| Sbjct 981 TGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 1040 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 118898 | |||||| | || | || ||||| || || | || ||| || || | ||||| | || Sbjct 1041 AGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCT 1100 Query 118899 GCAGCTGGCACAGTGGCGTTGG----CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 | || || ||| ||| || |||| |||| || |||||| ||| || || Sbjct 1101 GGGCCTT---CA-TGGTCTTGCGACCCTTGCCCGCCTTC-TCATACTTTTCGTAAAGAGC 1155 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 || ||||| || || | || | || || || || | || || | ||| | Sbjct 1156 CTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGT 1215 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 ||| | ||| || ||| || |||||||||||||| || || |||||||| ||| ||| Sbjct 1216 CCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAA 1275 Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134 || || || ||| | || || | || || || |||| || | || || | Sbjct 1276 CAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAA 1335 Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CC 119188 || ||| |||||||| || || ||||| | || | | || | | || || Sbjct 1336 GACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACC---AGGTCGCTTGTTGCC 1392 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | |||||| || |||| |||||| ||| || ||||||||||| || ||| ||| | Sbjct 1393 ACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTT 1452 Query 119249 GGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGC 119306 ||| || || || || ||| || ||| | | |||| | || ||||| || | Sbjct 1453 GGAGGTACCGTTGGTACCAGCGATGTAAGAGCC--AGTGGCACGGATTCGGTGGACGTTC 1510 Query 119307 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 119366 | || ||||| || ||| ||| ||||| || || | ||||| | | || || Sbjct 1511 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 1570 Query 119367 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGT 119426 || || || ||| | || | ||| |||||||| |||| |||||| ||| Sbjct 1571 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 1630 Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTGT 119484 |||||||| |||||||| || || | || ||| |||| | | || |||||| || Sbjct 1631 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 1688 Query 119485 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544 ||||||||||| ||| ||| || || || || |||| || || ||||| | Sbjct 1689 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 1748 Query 119545 ACATGTATTGGGG 119557 ||||| ||||| Sbjct 1749 TCATGTGCTGGGG 1761 >seq4896 Length=3982 Score = 145 bits (160), Expect = 9e-30 Identities = 530/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 1155 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 1214 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | | | | |||||| || Sbjct 1215 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 1273 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| |||| ||| || Sbjct 1274 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 1333 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 1334 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 1393 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 ||| || | ||| || | | ||| | | | || ||| || | |||| || Sbjct 1394 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 1450 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || || ||| ||| || |||||||| Sbjct 1451 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 1510 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | |||||| || | ||| | || ||||||||| ||||| || Sbjct 1511 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 1570 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 || || || | |||||||| ||||||||| || | |||| | | ||| | Sbjct 1571 GGCAGCAAAGGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 1629 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || |||||| |||| ||||| || || | ||||| | Sbjct 1630 TGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 1689 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || | ||| || |||||||| | || ||||| || || || ||| |||| Sbjct 1690 TTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 1749 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 1750 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 1807 Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | || ||| | | || | ||||| || || || || || |||| || || Sbjct 1808 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAG 1865 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || ||||| | | ||| ||| || | | ||| || | |||||||||| Sbjct 1866 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 1925 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || ||||| | |||||| |||||||| Sbjct 1926 AGATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 1960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618239728094160