Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7620 262 5e-65 seq4896 132 6e-26 >seq7620 Length=2775 Score = 262 bits (290), Expect = 5e-65 Identities = 938/1444 (65%), Gaps = 53/1444 (4%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| ||| | |||| || || || || ||||| |||| Sbjct 1761 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 1702 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339 ||||||| ||| || |||||| || | | |||| || || | || ||||||| Sbjct 1701 CTGGAGACCTACAACCTGATGTCG--AGCAAATTCTTCACCCATGCCTCCCCCACCCTCT 1644 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||| || || || ||||| |||||||| ||| || || |||| Sbjct 1643 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAAAGAGG 1584 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | ||||| |||| ||||| | | ||||| ||||| ||| ||| | Sbjct 1583 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 1524 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || || || |||| | | |||| | ||| || || || | Sbjct 1523 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 1464 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | ||| | | || |||||||| || || ||| ||| || || || | Sbjct 1463 ACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 1404 Query 104580 TAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| | | ||| || || | || |||| |||||||| |||| Sbjct 1403 TCGACCAGGGTGG-CAAC--AAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 1347 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | ||||||||||| |||| ||||| || | ||||||| || Sbjct 1346 ACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 1287 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 |||||| || ||| |||||||||||||| ||||||||||||||| | || ||| ||| Sbjct 1286 CCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 1227 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 || | ||| | ||| | ||||| || || || ||||| |||| ||| | || Sbjct 1226 ACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGC 1168 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCG 104866 |||||||| || || |||||| |||||| ||| | | | ||||| ||| | Sbjct 1167 GAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGACCATG 1108 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || |||| || | ||| | || || ||| || | || |||||||| || | Sbjct 1107 AAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAAC 1054 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||| ||||| ||| ||| |||| ||||| || || ||||| |||| Sbjct 1053 CCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACC 994 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| || ||||||||||| || || || | || | | | |||||| ||| Sbjct 993 ATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCT 934 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 || || ||||| || || | || || || | || || || || | || || Sbjct 933 GTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGATGCTT 879 Query 105107 GATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 | |||| | || | ||||| || || | |||| ||||| ||||| Sbjct 878 G-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGG 820 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 |||| || || ||||| ||| | ||||| || || ||| ||||||| Sbjct 819 ATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGA 760 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 || |||||| | ||||| |||||||| || |||| ||| || || || || || || || Sbjct 759 CCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CATGCCTT 702 Query 105280 T-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 | || || ||| || || |||| || || || |||||||| || || || | Sbjct 701 TCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTG 642 Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 | || || || || | || |||| ||| || ||||| || ||||| ||| Sbjct 641 CCCTCACTGCTTCG-GTGC--AGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGG 585 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453 | ||||| || || | || | || || || || |||| |||| |||| | | || Sbjct 584 GCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCTTCTGA 527 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 | || |||||||| |||| ||| | |||||||| | || |||| |||||||| Sbjct 526 CCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCT 467 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 || | || || ||||| || ||| || | || ||| |||| || || || ||||| Sbjct 466 GCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTT 407 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || || ||||| | |||||||| | | | | |||||| || ||||| | | || Sbjct 406 CGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGT 347 Query 105634 CAAC 105637 |||| Sbjct 346 CAAC 343 >seq4896 Length=3982 Score = 132 bits (146), Expect = 6e-26 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730 ||||| |||| || || ||||| ||| | | ||| | | ||||| | ||||| | Sbjct 1726 CTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 1668 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || | || ||||| | ||||| || || ||||| || ||| | | |||| Sbjct 1667 GACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 1608 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| | Sbjct 1607 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 1549 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || |||| | | || | |||||||||||||| || |||||||| || || ||| | Sbjct 1548 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 1489 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1488 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583076445842640