Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1296 109 4e-19
>seq1296
Length=8565
Score = 109 bits (120), Expect = 4e-19
Identities = 200/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818
|||||||| || |||| | |||||||| ||||| | |||| | ||| ||| ||
Sbjct 600 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 542
Query 29819 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874
|| || | | ||| ||| |||||| | |||||| | ||| ||||| || ||
Sbjct 541 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 482
Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTC 29933
|| | ||||||| || ||||||||||| || || |||| | ||| | | || |
Sbjct 481 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCT-GC 423
Query 29934 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993
| || | | || |||||| |||||||||| || || || | ||||||||| ||||
Sbjct 422 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 363
Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
| || || || ||||| |||||||| | || | ||||||||| || ||
Sbjct 362 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGTTGGCA 314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406185186054312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |