Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1296 91.5 1e-13 >seq1296 Length=8565 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||| ||||| || ||||| | |||||||| | || || |||||||||||||| || Sbjct 313 CTGCCAACTCTACCAGCGATCCTGCGACATGGGTCTCGGCGTCCCGTTCAACATTGCCAG 372 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| || ||||||| || || ||| | ||||| ||| || ||| Sbjct 373 CTACGCACTGCTGACACACATGATGGCGCACGTCTGCGAATTGGTGCCT-GGCAGC-CTC 430 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| |||||||| ||||||| ||||| | || ||| | ||| Sbjct 431 ACTCACGTCATGGGCGATGCGCACGTCTACCTCGACCACGTGGATGCTCTCAACACGCAG 490 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAG 34859 || | || |||||||| || || |||| | |||| ||||| Sbjct 491 CTTGAGCGCGAGCCCCGTGACTTTCCAGAGCTGGAGATTACTCGAG 536 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 6486 CTCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCC 6545 ||||| |||| | |||| || || |||||||| || | ||||| | ||| Sbjct 536 CTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTTGAGAG 477 Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGG 6603 || | ||||| ||||||| |||||||| |||| |||| | ||| || ||| Sbjct 476 CATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAG-GCTGCC-AGG 419 Query 6604 AACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAA 6663 ||||| | ||| || || ||||||| || ||||| ||||| || ||||||||||| Sbjct 418 CACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGTTGAA 359 Query 6664 CGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 ||| || || | |||||||| | ||||| || ||||| |||||| Sbjct 358 CGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGTTGGCAG 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448120715461920