Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1296 123 2e-23 seq2402 87.8 1e-12 >seq1296 Length=8565 Score = 123 bits (136), Expect = 2e-23 Identities = 204/290 (70%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589 ||||||||| ||||||| | |||||||| ||||| | |||| | ||| ||| | Sbjct 601 GTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGC 543 Query 29590 CCTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCC 29645 ||| || | | ||| ||| |||||| | |||||| | ||| ||||| | Sbjct 542 CCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGT 483 Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCT 29704 | || | ||||||||||| ||||||||||| ||||| |||| | ||| | | || Sbjct 482 TGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCT-G 424 Query 29705 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29764 || || | | || |||||| |||||||||| || || || | ||||||||| ||| Sbjct 423 CCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATG 364 Query 29765 TTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || || || || ||||| |||||||| | || | ||||||||| ||||| Sbjct 363 TTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGTTGGCA 314 >seq2402 Length=6404 Score = 87.8 bits (96), Expect = 1e-12 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 53494 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-CT 53552 ||||||||| | ||||||| ||| | || |||| |||||||||||||| || | Sbjct 4831 CGTCAAGGTCCGTGTGAGGACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCCTCTCG 4890 Query 53553 TCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTTCGA 53610 |||||| || ||||| || || | | || | | ||||||||| ||||||||| Sbjct 4891 TCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCG--TCAGGAGGATATGCCCTTCAG 4947 Query 53611 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 53670 || ||| || ||| || ||| | ||||| |||||||||||| |||| || | ||||| Sbjct 4948 CAGGGAGGGTGTGACACCGGACATTATCATTAACCCCCACGCCATTCCGTCGCGAATGAC 5007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406038031417396