Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06]
25,286 sequences; 50,152,336 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2806 107 4e-18
seq9298 98.7 2e-15
seq1688 93.3 1e-13
>seq2806
Length=5600
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| ||||||||||| || ||||| || ||||||||||| |||| | || |
Sbjct 1798 GAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 1739
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || || || |||||||| | ||||||||| | | ||| || ||
Sbjct 1738 ACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTC 1679
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || || | || | | | || ||| || || |||||
Sbjct 1678 CTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGT 1619
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||||||||| || |||| ||||||
Sbjct 1618 GATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 1580
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || ||||| ||||| || ||||||||||| ||| | ||||| || ||
Sbjct 1563 AGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 1504
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| || | ||| || || | | || |||||||| ||
Sbjct 1503 TCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 1444
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||| ||| | || | | |||| || || || ||||| || |||||
Sbjct 1443 TGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTC 1384
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||||| ||||||
Sbjct 1383 TTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1352
Score = 102 bits (112), Expect = 2e-16
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||||| || |||||||||||||||| | ||| | |||||
Sbjct 1061 GAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATC 1002
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || |||||||| || || | ||||||||| | | ||| || ||||| ||
Sbjct 1001 CTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 942
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || |||||| | || | | | || || ||| || || || ||||| ||
Sbjct 941 CTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGT 882
Query 152072 TTTGCCCGT 152080
||||||||
Sbjct 881 CTTGCCCGT 873
>seq9298
Length=1639
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | |||| ||||| || || || || ||||||||
Sbjct 343 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 284
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | ||| || ||||| || || || || |||||| | ||
Sbjct 283 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 224
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || || || || |||||||| || |||||||||||
Sbjct 223 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 165
>seq1688
Length=7796
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||| || ||||||||||| ||| | || | |||||
Sbjct 5216 GAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 5275
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 5276 CTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 5335
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | |||| ||| ||| || || || || || ||
Sbjct 5336 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGT 5395
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| |||||||| ||||| || |||| |||||| || ||
Sbjct 5396 CTTCCCCGTGAGGGTCTTGACAAAGATCTGCATCTTGCC 5434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153446988742906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |