Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680605.1_202016-07-06] 25,286 sequences; 50,152,336 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1688 178 3e-39 seq2806 154 3e-32 seq9298 138 2e-27 seq4896 114 3e-20 seq7196 95.1 3e-14 >seq1688 Length=7796 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||||| || || |||||||||||||| Sbjct 5201 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 5260 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | || || ||||| || Sbjct 5261 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGG 5320 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 5321 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 5380 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| ||||| | ||||| || || |||||||| || Sbjct 5381 CTCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCATCTT 5431 >seq2806 Length=5600 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | || || || || || |||||||| || Sbjct 1351 ACCACCACGGAGGCGGAGGACGAGGTGGAGAGTTGACTCCTTCTGAATATTGTAGTCGGC 1292 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| || |||| || || |||||| || Sbjct 1291 GAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGG 1232 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| ||||||||||| | || ||| | ||||| ||||| |||| || || Sbjct 1231 AATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCAC 1172 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| |||||||| || | ||||| |||| Sbjct 1171 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGA 1134 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| ||||| || | || || || |||||||||||||| Sbjct 1579 ACCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 1520 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || ||||||||||| | || ||||| ||| || Sbjct 1519 GAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGG 1460 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | ||| || | || || ||||| || | ||| || Sbjct 1459 AATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCAC 1400 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1399 CTCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1352 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || || || ||||||||||| || | Sbjct 1075 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAG 1016 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||| || |||| || || ||||| || Sbjct 1015 AGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGG 956 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| || ||||| | ||||| Sbjct 955 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACC 896 Query 283053 TCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| || || ||||| ||||||| Sbjct 895 TCGAGGGTAATGGTCTTGCCCGTCA 871 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || ||||| | || || || |||||||||||||| | Sbjct 1807 ACCGCCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1748 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || || || || || |||||||| | || || |||||| || Sbjct 1747 CAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGG 1688 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || ||| | || || || || | ||||| Sbjct 1687 GATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCGAC 1628 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| || || |||||||| Sbjct 1627 CTCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 1580 >seq9298 Length=1639 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| || ||||||||||| || || || || || |||||| Sbjct 343 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 284 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || ||||||||||| |||||||| | || || | || Sbjct 283 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 224 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| ||||| ||||| ||||| ||||||| ||||| ||||| Sbjct 223 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 165 >seq4896 Length=3982 Score = 114 bits (126), Expect = 3e-20 Identities = 174/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| || | || | | ||| |||||||| | ||| || | || ||| Sbjct 1387 ATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCC 1328 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || |||||||||| || || |||||| ||| || ||||| ||||| || || || | Sbjct 1327 CTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTC 1268 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || ||||||| || || || ||| |||||||||| || |||||| Sbjct 1267 CTCGTCGCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAG 1208 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || ||| || || || ||||||||||| ||||||||| | || || || | | Sbjct 1207 AACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAG 1148 Query 230403 CCCGGTGT 230410 | ||||| Sbjct 1147 GCTGGTGT 1140 >seq7196 Length=2123 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726 || ||||| |||| ||||| || |||| | || |||||||||| || || || | Sbjct 1027 ACACCACCCTCGAAGTTCTTGAGGGCCTTGGACAGGGCACCGAGAGAGTCACGATCGAGG 1086 Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785 ||||||| ||||| || || ||||| | || ||| | ||||| ||||| |||| ||| Sbjct 1087 TAGTTGGTGGGCTCGTCCAGGACGATAAGATGAGGTCGCTGCCA-AGAGCAGGCGGCGAG 1145 Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAATTC 315845 || ||| | || ||||||||||| ||||| |||||||| |||| | || || Sbjct 1146 CACAGTCTTGACACGCTGACCACCAGACAGACCACGCATGCGAGAGTGAGAGACAAGCTC 1205 Query 315846 TGGGTCAAGGCCAA 315859 | ||| ||||||| Sbjct 1206 GGCGTCGAGGCCAA 1219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046400080705044