Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2597 140 7e-28 seq1454 87.8 4e-12 >seq2597 Length=5433 Score = 140 bits (154), Expect = 7e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 ||||||||||| || || ||| ||||||||||| ||||| ||||||||| | | || Sbjct 4049 GGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTC 4108 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || || || ||||||| || ||||| | | |||||||| | || |||||| ||| Sbjct 4109 GCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 4168 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || || ||||||||||||||||| ||||||||| ||||||| |||| | ||||| Sbjct 4169 TCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGT 4228 Query 230632 GT 230633 || Sbjct 4229 GT 4230 >seq1454 Length=6865 Score = 87.8 bits (96), Expect = 4e-12 Identities = 199/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 282393 ACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAAT-TTCTAG-GAGACTGGGAAAAC 282450 ||||| || |||||||||| | |||||| | |||| ||| || ||||| ||||| Sbjct 3063 ACGATGGGAGTGATGAACTCTTGCAAGAAGTCCGGAACCTTCAAGAGAGAC-GGGAACTG 3121 Query 282451 AGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 282510 || || | ||||| || | ||||| || ||| |||| || |||| || | Sbjct 3122 GACT-TGAAGGAAGTTGATCAGGAGACCCTTGATATGACTTCCATCGTGATCCTGATCAG 3180 Query 282511 TCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTT 282570 |||||||||||| ||| ||||||| ||| |||||| ||||||| | | | Sbjct 3181 TCATGATCATCAGATGGCCGTATCGAAGACTCTTGGTGTCTGTGTACACCTGCTTGTGCT 3240 Query 282571 GAAGGCCCAAAATTTGTTTGA-GCGCGGTGATTTCTTCGTTCTTTGTGATACTTG-CCAC 282628 || |||| | || |||| | | | |||||| | |||||| ||||| || | | || Sbjct 3241 TCAGACCCAGGAACTGCTTGATGTTCTG-GATTTCCTGGTTCTTGGTGAT-CTGGTCGAC 3298 Query 282629 AGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCA 282677 |||||||| ||||| |||| |||||| ||||| || || |||||| Sbjct 3299 GCTGGCATCGCGGACGTTGAGCATCTTACCACGGAGTGGGAAGACACCA 3347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057471653040110