Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 136 8e-27
seq2597 122 2e-22
>seq4116
Length=4278
Score = 136 bits (150), Expect = 8e-27
Identities = 187/259 (72%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844
||||| || || || |||||||||| || || ||| |||||||||||||||||
Sbjct 2775 GCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACC 2716
Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904
||||||||| || |||| | | | | |||||||| ||||| || || || | ||
Sbjct 2715 CTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGT 2656
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| ||| || || |||||||| |||||||| || | | |||||||| || | ||
Sbjct 2655 ACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTA 2596
Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
|| || | |||| | || || | | || | |||||||||| ||||||||| ||||
Sbjct 2595 GGTCTCCAGGACACGCTCAATATCGTCACCCCAG-ATGCCGACAGACACACGCATGATCA 2537
Query 95024 TGTCCTGAGGGCGCTCAAC 95042
||| ||| || ||||||||
Sbjct 2536 TGTGCTGGGGACGCTCAAC 2518
>seq2597
Length=5433
Score = 122 bits (134), Expect = 2e-22
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||||| || || || |||||||| || ||||| || || ||||| ||||||
Sbjct 3785 GTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 3844
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | || | ||||||| || |||| ||||| ||| |||| ||| | |||
Sbjct 3845 CTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 3904
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGC 102064
|| |||||||| |||||||||||||
Sbjct 3905 GAGGGTCTTCACACCGACTTTGCATGC 3931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989254382867135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |