Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4116 390 3e-103 >seq4116 Length=4278 Score = 390 bits (432), Expect = 3e-103 Identities = 1080/1632 (66%), Gaps = 38/1632 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || | | ||||||||| |||| | || ||| |||| || Sbjct 2620 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 2679 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||| || || ||| |||||||| | ||| || || |||| Sbjct 2680 TGCTTCCTGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 2739 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || || || | | || ||||| | ||||| Sbjct 2740 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACG-TCCACCGAATCCGTGC 2798 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | |||||| ||| || || || ||| || || | ||||||||| Sbjct 2799 CACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTT 2856 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| ||||||||||||||||||| ||||| || || Sbjct 2857 CGTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCC 2916 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || || ||||| || || ||| | |||||||| ||||| || || || Sbjct 2917 TTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAG 2976 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || |||||| || || ||| || | || Sbjct 2977 AACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGAT 3036 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | || || |||| | Sbjct 3037 CTCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGT 3094 Query 364022 GTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 | || ||||| |||| || ||||| | | || | | ||||| |||||||||||||| Sbjct 3095 GCCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGA 3152 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 || ||| |||| ||| ||||| || || |||||||| |||| ||||||| | || Sbjct 3153 GAAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGA 3212 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 |||||| ||||| || | |||| ||| | ||||| || |||||||||||| Sbjct 3213 GGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAG 3272 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258 ||||||| || |||| || || | || | || ||| || || ||||||||||| || | Sbjct 3273 CAACCAGAAGAACCTGGGCACCA-TCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGT 3331 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318 || ||| || || ||| ||| || || |||||||| || | || || || |||| Sbjct 3332 ACTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCA 3391 Query 364319 TAA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372 | | | |||| | || | |||| |||| | | | ||||| || | || Sbjct 3392 TCAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCG 3451 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427 | |||| || ||| | |||||||| ||| | || || || | ||||| || | Sbjct 3452 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 3511 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || || ||||| || || || |||||| ||||||| ||||| || ||||| | ||| Sbjct 3512 GC-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTT 3566 Query 364488 TATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545 | ||||| ||| | || || || || || ||||||| || || ||| ||||| Sbjct 3567 CCT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATC 3624 Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604 || || || || || ||| || | ||||||||| ||| | |||| || |||| Sbjct 3625 TTCGAGACCATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGG 3683 Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 ||||| || | |||| || || || |||| | ||||||| || | || Sbjct 3684 TCCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTG 3743 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 |||||| | ||| |||| || ||| ||||||| | || | | || ||| |||| Sbjct 3744 GAATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCA 3803 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 || | ||||||| || | || || ||||| || || |||| | |||||||| Sbjct 3804 CGGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCT 3863 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || ||||||||||||||||| || | || ||| | || ||||| || || | Sbjct 3864 GGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGC 3923 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | ||| || || | || ||||||| ||| ||| || ||||| Sbjct 3924 TGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTG 3983 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964 | || |||||| ||| ||||| |||| || ||||| | |||||||| || Sbjct 3984 GTCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAA 4043 Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024 | || | || | ||| | | ||||| ||||| ||||| ||||| ||| | Sbjct 4044 CATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGT 4103 Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 | || | ||||| ||||| || ||||| || || |||| |||||| | ||| | Sbjct 4104 CGTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 4163 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| | || ||| | |||| | || |||||| || ||| ||||| ||| Sbjct 4164 CATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGG 4223 Query 365145 TCTTAAGACAGG 365156 || ||||| || Sbjct 4224 CCTGAAGACGGG 4235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302919470429654