Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 390 3e-103
>seq4116
Length=4278
Score = 390 bits (432), Expect = 3e-103
Identities = 1080/1632 (66%), Gaps = 38/1632 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || ||| | || || | | ||||||||| |||| | || ||| |||| ||
Sbjct 2620 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 2679
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||| || || ||| |||||||| | ||| || || ||||
Sbjct 2680 TGCTTCCTGGTCGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 2739
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || || || || || | | || ||||| | |||||
Sbjct 2740 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACG-TCCACCGAATCCGTGC 2798
Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| | | |||||| ||| || || || ||| || || | |||||||||
Sbjct 2799 CACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTT 2856
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| ||||||||||||||||||| ||||| || ||
Sbjct 2857 CGTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCC 2916
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || || ||||| || || ||| | |||||||| ||||| || || ||
Sbjct 2917 TTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAG 2976
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || ||||| | || || || || |||||| || || ||| || | ||
Sbjct 2977 AACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGAT 3036
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| || ||| | | | | | ||| | ||| | || || |||| |
Sbjct 3037 CTCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGT 3094
Query 364022 GTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079
| || ||||| |||| || ||||| | | || | | ||||| ||||||||||||||
Sbjct 3095 GCCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGA 3152
Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139
|| ||| |||| ||| ||||| || || |||||||| |||| ||||||| | ||
Sbjct 3153 GAAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGA 3212
Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199
|||||| ||||| || | |||| ||| | ||||| || ||||||||||||
Sbjct 3213 GGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAG 3272
Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258
||||||| || |||| || || | || | || ||| || || ||||||||||| || |
Sbjct 3273 CAACCAGAAGAACCTGGGCACCA-TCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGT 3331
Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318
|| ||| || || ||| ||| || || |||||||| || | || || || ||||
Sbjct 3332 ACTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCA 3391
Query 364319 TAA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372
| | | |||| | || | |||| |||| | | | ||||| || | ||
Sbjct 3392 TCAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCG 3451
Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427
| |||| || ||| | |||||||| ||| | || || || | ||||| || |
Sbjct 3452 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 3511
Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487
|| || ||||| || || || |||||| ||||||| ||||| || ||||| | |||
Sbjct 3512 GC-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTT 3566
Query 364488 TATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
| ||||| ||| | || || || || || ||||||| || || ||| |||||
Sbjct 3567 CCT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATC 3624
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604
|| || || || || ||| || | ||||||||| ||| | |||| || ||||
Sbjct 3625 TTCGAGACCATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGG 3683
Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664
||||| || | |||| || || || |||| | ||||||| || | ||
Sbjct 3684 TCCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTG 3743
Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724
|||||| | ||| |||| || ||| ||||||| | || | | || ||| ||||
Sbjct 3744 GAATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCA 3803
Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784
|| | ||||||| || | || || ||||| || || |||| | ||||||||
Sbjct 3804 CGGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCT 3863
Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844
|| ||||||||||||||||| || | || ||| | || ||||| || || |
Sbjct 3864 GGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGC 3923
Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904
|| || || | ||| || || | || ||||||| ||| ||| || |||||
Sbjct 3924 TGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTG 3983
Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964
| || |||||| ||| ||||| |||| || ||||| | |||||||| ||
Sbjct 3984 GTCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAA 4043
Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024
| || | || | ||| | | ||||| ||||| ||||| ||||| ||| |
Sbjct 4044 CATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGT 4103
Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084
| || | ||||| ||||| || ||||| || || |||| |||||| | ||| |
Sbjct 4104 CGTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 4163
Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144
||||| | || ||| | |||| | || |||||| || ||| ||||| |||
Sbjct 4164 CATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGG 4223
Query 365145 TCTTAAGACAGG 365156
|| ||||| ||
Sbjct 4224 CCTGAAGACGGG 4235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302919470429654
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