Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq16 140 2e-28 seq25647 136 3e-27 >seq16 Length=2124 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 582 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 523 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 522 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 488 >seq25647 Length=245 Score = 136 bits (150), Expect = 3e-27 Identities = 86/93 (92%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTT 25957 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 202 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 143 Query 25958 AATCCTTTCATGCGCGTCACTAATTAGATGACG 25990 ||||| ||||||||||||||||||||||||||| Sbjct 142 AATCCATTCATGCGCGTCACTAATTAGATGACG 110 Score = 123 bits (136), Expect = 2e-23 Identities = 86/95 (91%), Gaps = 7/95 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 35 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 94 Query 25957 TAATCCTTTCATGCGCGTCA-CTAATTAGATGACG 25990 |||||| ||||||||||||| |||||||| ||||| Sbjct 95 TAATCCATTCATGCGCGTCATCTAATTAG-TGACG 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334841075852507