Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq16 140 2e-28
seq25647 136 3e-27
>seq16
Length=2124
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 582 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 523
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 522 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 488
>seq25647
Length=245
Score = 136 bits (150), Expect = 3e-27
Identities = 86/93 (92%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTT 25957
||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 202 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 143
Query 25958 AATCCTTTCATGCGCGTCACTAATTAGATGACG 25990
||||| |||||||||||||||||||||||||||
Sbjct 142 AATCCATTCATGCGCGTCACTAATTAGATGACG 110
Score = 123 bits (136), Expect = 2e-23
Identities = 86/95 (91%), Gaps = 7/95 (7%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 35 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 94
Query 25957 TAATCCTTTCATGCGCGTCA-CTAATTAGATGACG 25990
|||||| ||||||||||||| |||||||| |||||
Sbjct 95 TAATCCATTCATGCGCGTCATCTAATTAG-TGACG 128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334841075852507
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |