Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq4644 118 9e-22
seq7763 102 7e-17
seq6050 82.4 6e-11
>seq4644
Length=3541
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| ||||| |||||| | ||
Sbjct 2524 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACCCTTGAGGTGGAATCGTCC 2465
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | ||| || || || |||||||| || ||||| || ||||||
Sbjct 2464 GACACCATTGACAATGTGAAATCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAA 2405
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||||||||| ||| | ||||| ||| || || ||| ||||||
Sbjct 2404 CAGCGACTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAAC 2345
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || | ||| | || ||||||| |||
Sbjct 2344 ATCCAGAAGGAGTCGACTCTGCACCTGGTTCTTCGTCTGCGCGGTGGT 2297
Score = 107 bits (118), Expect = 2e-18
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317
|| || || || || || | |||||| | ||| || |||| || ||||| ||||||
Sbjct 2988 ACCCTCGAGGTCGAGTCCTCGGATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAG 2929
Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377
||||| || || ||||| || || || || || || |||||||| ||| | |||||| |
Sbjct 2928 GAGGGCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTTGAGGATGGC 2869
Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||||| |||||||||||||||| || || || || |||
Sbjct 2868 CGCACTCTCTCCGATTACAACATCCAGAAGGAGTCGACC 2830
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || ||||||| || || || | | |
Sbjct 2296 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACCATCACTCTGGAGGTCGAGTCGAGC 2237
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || || ||||| ||||||||||| || || || || ||
Sbjct 2236 GATACCATTGACAACGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAG 2177
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| ||||| || || ||| | || || |||||| | ||||| ||||||
Sbjct 2176 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGTCCGACTACAAC 2117
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | ||| | ||| | || | || || |||
Sbjct 2116 ATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCCGTCTCCGTGGCGGT 2069
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| ||||| || |||| || || ||||| | |||| || | ||| | ||||
Sbjct 2728 ACTGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCGACAACGTCAAGTCG 2669
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||| |||||||||||||| || || || || || || || || ||||||||
Sbjct 2668 AAGATCCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTGATTTTCGCCGGCAAG 2609
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||| ||| || |||| ||||| ||||| || || || ||
Sbjct 2608 CAGCTTGAGGATGGCCGAACCCTCGCCGACTACAATATTCAGAAGGAGTCAAC 2556
>seq7763
Length=1926
Score = 102 bits (112), Expect = 7e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || ||||| || || | || || || || |||| || || ||||| |
Sbjct 1234 AAGATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 1175
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || ||||||||||| || || |||||
Sbjct 1174 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1115
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || ||||| ||||| ||| | |||||| ||||||| | ||| |||
Sbjct 1114 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 1055
Query 22396 AACATTCAAAAAGA 22409
||||| || || ||
Sbjct 1054 AACATCCAGAAGGA 1041
>seq6050
Length=2754
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || || || || | || ||| |
Sbjct 2605 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 2546
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| || || || || || || || ||
Sbjct 2545 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACT 2486
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || || ||||| ||| | |||||| ||| ||| | ||||| |||||||| || ||
Sbjct 2485 GATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGAACCCTTTCCGACTACAACATCCAGAA 2426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419595014036305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |