Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2597 174 3e-38
seq4644 167 4e-36
seq7763 161 2e-34
seq9101 131 3e-25
seq7507 109 1e-18
seq9057 91.5 3e-13
>seq2597
Length=5433
Score = 174 bits (192), Expect = 3e-38
Identities = 564/865 (65%), Gaps = 23/865 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|| ||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 4234 CAGGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 4175
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|||||| ||| |||||||||||| |||||||| ||| | ||| || ||
Sbjct 4174 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCC 4115
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || || | |||||| || ||||||||||||||||| |||| ||||| | |||
Sbjct 4114 GAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTT 4055
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | || | |||||||| ||| ||| | ||| |||| || ||| ||| ||
Sbjct 4054 CATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGC 3995
Query 10175 TTCCTCGACGATGCTCT---TTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
|| || |||| || | ||| | | || || || || ||| | || |
Sbjct 3994 ATCGGTGATGATGTCCTGGATGACCTGCTTGCTGGCACGGC----CCTTGAGGTGGGAGT 3939
Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||||| | |||| | ||| || |||||||| || ||||| ||||||||| |
Sbjct 3938 GGAGGAGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAA 3879
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350
| ||| || |||||||| || || || |||||||| |||| | || | |||
Sbjct 3878 AGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGC 3819
Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCGGTC- 10408
||| | | |||||| ||| | |||||||||| |||| || ||||| | | ||
Sbjct 3818 TGAAGAAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCT 3759
Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467
| | | || |||||| | |||||||| | | ||||| ||||| |
Sbjct 3758 TGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAA 3699
Query 10468 TAGCCTCGAAGAGCTTGTTACGCTCGGTCTCG-TCCTCAATAAGAGCATCAAGGAGCAGG 10526
| || | |||||| | | | || | | || | |||| || | |||| ||| ||
Sbjct 3698 TGGCGTTGAAGAGGTAGGTTCG-TTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC 3640
Query 10527 GAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGC 10585
||||| |||| ||||| | |||| | |||| | ||||||| ||| || ||
Sbjct 3639 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGGGC 3581
Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645
| |||| | ||| || || || | | |||||||| | || ||||| ||
Sbjct 3580 CTCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTC 3521
Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA---- 10701
| | || |||||| |||||||||| || |||| |||| || | |||
Sbjct 3520 AGAGGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCG 3461
Query 10702 GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAG 10761
||| || |||||| | ||||| | || | | |||||| | ||||||||||
Sbjct 3460 GTTGTT----CCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAG 3405
Query 10762 TGGCAACGGCCTTCTTGTACATCTG 10786
||| |||||||||||||||||||
Sbjct 3404 AGGCCTCGGCCTTCTTGTACATCTG 3380
>seq4644
Length=3541
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||| ||| || || ||||| || |||||||| || ||| |
Sbjct 2298 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 2357
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || ||||||| ||||| || || |||
Sbjct 2358 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 2417
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| | || || || |||||||| | ||||| ||
Sbjct 2418 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 2477
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || ||||| ||||||||||||||||| ||||||||
Sbjct 2478 TCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 2524
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | || | ||| || || ||||| || |||||||| |||||||||
Sbjct 2801 CCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAG 2860
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || |||||||| ||
Sbjct 2861 AGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGG 2920
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| |||||||| || | || || ||
Sbjct 2921 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACC 2980
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||| ||||| || |||||
Sbjct 2981 TCGAGGGTAATGGTCTTGCCCGT 3003
Score = 140 bits (154), Expect = 6e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || || || || || |||| |
Sbjct 2526 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTTGACTCCTTCTGAATATTGTAGTCGGCG 2585
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || |||
Sbjct 2586 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 2645
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||| ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 2646 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 2705
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | |||||| || || || ||||||||||||||||
Sbjct 2706 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGA 2742
>seq7763
Length=1926
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || ||| ||| || |||||||| || |||
Sbjct 1005 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1064
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||||| || |||||||| ||
Sbjct 1065 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 1124
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 1125 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1184
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||||||||||||||| || ||||||||
Sbjct 1185 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 1231
>seq9101
Length=1602
Score = 131 bits (144), Expect = 3e-25
Identities = 344/516 (67%), Gaps = 32/516 (6%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | ||||||| ||||||||||||| || || || ||||||
Sbjct 621 CGCCACTGGATGTACTCGGAGGGGGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAAGCG 562
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | ||| || || || ||||| |||| | | | | || || ||
Sbjct 561 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 502
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || |||||||| |||||||| || | |||||| ||||| ||||| || ||
Sbjct 501 ATGAG-CTCACCAGTGAGGACGTTGATGAGGGTGGACTTGCCGGCACCGTTGGGACCGAT 443
Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTG-----CTGAAGATCTCA 225214
||| |||| ||||| || | ||| || | || | |||| | | |
Sbjct 442 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGAAATGTCGGTGATCTGAGGCTTGGA 383
Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTCC 225268
|| | | |||| |||| || | ||||||| |||||| | ||
Sbjct 382 GGTACCG--GGGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGGCC 331
Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328
|||| | | |||||| ||||| |||||||| ||||| ||| | || | | | |
Sbjct 330 TTGGTCTTGACACCCTCGAGGAAACCGGGCTCAGGGAAGGAGAACTCGATCTCGGAGGCA 271
Query 225329 TTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385
|| |||||||||||| |||| ||| ||| || |||||||||| ||||||
Sbjct 270 CCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACGCGCTG-GACGAAAGCAGCCAGGTTA 214
Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC 225444
|| || | ||||||||| | |||||| || ||||| ||| | ||| ||
Sbjct 213 CCCTTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACAATGTGCTG-GCAGACGTT 158
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGA 225480
||| |||||||||||||||||||| || ||||||||
Sbjct 157 GTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGA 122
>seq7507
Length=2007
Score = 109 bits (120), Expect = 1e-18
Identities = 430/669 (64%), Gaps = 17/669 (3%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||||||| | || || || |||| | || | | |
Sbjct 1276 TAACGCCACTGAAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCGACGTGCTCCAGA 1217
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | || |||| |||||| |||||| || || |||
Sbjct 1216 GCGTGCTGCTTGATGTAGCCGATACGCAAGTTGGGGTGCTTCTCGACCTTTCCGGTAGTA 1157
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | |||||||||||| | |||||| || |||| |||||| || || |||||||||
Sbjct 1156 GGAATGGTCTCGCCGGTGAGCAACTTGATCAGGGTAGACTTGCCAGCTCCGTTGGGGCCA 1097
Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TGCTGA-AGATCTCA 225214
|| | | ||| ||||| |||| || | ||| | || | ||| || | ||
Sbjct 1096 ATGATGGCAACACGGGACGACAGTGTCAGCTGGCAAGAGACCTCATGCAGAGAAGGCTTG 1037
Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCAC----GCCACGCAGCTTCATGATGGCACGGTCCTT 225270
|| | | |||| | | | ||| | || || | ||||||||||| | |
Sbjct 1036 GGAGCCTTGGGGTACGTGTACGACACGTTGGACATGCGG----ATGATGGCACGAGTCAT 981
Query 225271 GGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTT 225330
||| | | || ||||| ||||| ||||||| ||| | | | ||
Sbjct 980 GGACTTGACGCCAGTCAGGATACCGGGGGGAGGGAACTTGAACTGGACGTTGGAGGCCGA 921
Query 225331 CAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAG 225390
||| |||||| |||||||| || | | || || |||| |||||| ||
Sbjct 920 CAGAGTGTAGTAGCTCTTGGCCTCGGGGCGGATCTCGACAAAGGCAGCCAGGTTGCCCTT 861
Query 225391 GTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAG 225450
|| | ||||| ||| |||||| || || | | | || ||| ||
Sbjct 860 GTAGCAAGCCAGCTTCTTGTTGGGCTCGTAGTGGTAGATGTCGGTGGTGACGTTGTCGAG 801
Query 225451 GAAGCCAGAGTCGTGGGACACAAT--GATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508
||||||||||||||| || ||||| || | || | | | || ||||||||
Sbjct 800 GAAGCCAGAGTCGTGAGAAACAATCAGACTGGTGATATCTGGATGAG--TCTTGAGGTAG 743
Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568
| |||||| || | |||| || || | ||||| |||||||||||||| || |||
Sbjct 742 TTCTCGAGCCACGCAATGTTGGCAACATCAAGATGGTTGGTAGGTTCGTCCAGGAGAAGG 683
Query 225569 ATGTCAGCATCAATG-AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627
| |||||| | || || ||||| || | |||| ||||||||| ||||| || || ||
Sbjct 682 ACATCAGCA-CGCTGAAGCATGGCTCGGGCTAGAGCCAGCTTCATCTTCCAACCACCAGA 624
Query 225628 CAGGGAGCC 225636
|| ||||||
Sbjct 623 CAAGGAGCC 615
>seq9057
Length=1686
Score = 91.5 bits (100), Expect = 3e-13
Identities = 170/247 (69%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 225751 GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAG 225809
|||||| || | | ||| | ||| | |||||| || ||| | || ||| || || |
Sbjct 1431 GGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAAGACGGTCTTGACCTCGCT 1372
Query 225810 AAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGC 225869
|| | |||||| ||||| | ||| | || || ||||| | || || |||||
Sbjct 1371 CTGCTT-GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGC 1313
Query 225870 CCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGG 225929
| | |||||||||||| || ||||| | | || ||||||| | |||| | ||
Sbjct 1312 CGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCT 1253
Query 225930 AGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCAC 225989
||| || || |||||| |||| |||||||| ||||| || | ||| || |||||||
Sbjct 1252 GGTTGAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCAC 1193
Query 225990 CCTCCTC 225996
|||||||
Sbjct 1192 CCTCCTC 1186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921322907280840
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