Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2597 122 2e-22 seq9057 84.2 5e-11 >seq2597 Length=5433 Score = 122 bits (134), Expect = 2e-22 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||| | || |||||| ||||||||||| ||||| ||||||||| | || || Sbjct 4049 GGCATGAACGCCGACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTC 4108 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | ||||| || ||||| ||| |||||||| | ||| |||||| ||| Sbjct 4109 GCCCTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 4168 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || || || || || ||||||||||| ||||||||| |||| || || Sbjct 4169 TCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 4218 >seq9057 Length=1686 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || |||| ||| |||| || || ||||| ||||| || || || | || Sbjct 1365 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGCCGGAACC 1306 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || ||||||||||| | |||||||| || || | || | ||| || Sbjct 1305 GTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCTGGTTGAG 1246 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||| || |||| || || ||||| || ||| | || ||||||||||| Sbjct 1245 CAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCACC 1192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102512645491950