Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 329 3e-85
>seq4116
Length=4278
Score = 329 bits (364), Expect = 3e-85
Identities = 1089/1676 (65%), Gaps = 52/1676 (3%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| ||||| ||| || |||||||||||||| ||||||| |
Sbjct 2455 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 2514
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| ||||| || || || || | ||||| || | |||| || || ||||
Sbjct 2515 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGAT 2574
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897
|| | ||| || | | | || ||| | ||| | ||| ||| ||
Sbjct 2575 ATTGAGCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCC 2634
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956
|| ||||| ||||| || || || || ||| ||| |||| || || |||||| | |||
Sbjct 2635 CCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGAC 2694
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| || | ||| ||| || |||| || | |||||| |||||| | |||||
Sbjct 2695 -ATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTC 2753
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076
|| ||||| || ||||| | | |||||| | ||||||| || || |||||
Sbjct 2754 CAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACAT 2813
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
| |||||||| || ||||||||||| || ||| ||||| || |||||||||||| |
Sbjct 2814 CGCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACAC 2873
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| || ||||| ||||||||||| | | | ||| | || || |||| || ||
Sbjct 2874 TGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGA 2933
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|||||||||||| || || | ||| | |||||||| |||||||||||||| ||
Sbjct 2934 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGA 2993
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
|| | ||| | ||||| ||| ||||||||| | || || || || ||||| || ||
Sbjct 2994 GGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 3053
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376
|||||| ||| | ||||| || | |||||||| || || ||||| ||| |||||
Sbjct 3054 CGAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTG 3113
Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCA---------GGGCAA 94427
| ||| || || || | |||| ||||||| | | ||||||
Sbjct 3114 CTATGG---------CGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAA 3164
Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
|| | ||| ||| | || |||||| ||| || ||| | || | ||| ||
Sbjct 3165 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGA 3224
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
||| || | |||| ||| | | |||||| | ||| |||| |||| ||||||| ||
Sbjct 3225 GACCGGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGA 3283
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
|||| || ||| ||||| ||||| |||||||||||| ||||||| | || |
Sbjct 3284 ACCTGGGCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTG 3343
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666
| ||| ||||||| || ||||| | || | |||| | ||||| | || |
Sbjct 3344 ATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTG----CCTTCGTTC---AT--CA 3394
Query 94667 AC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--G 94723
|| ||| | ||||| | || | || || | || || | ||| || |
Sbjct 3395 ACTACG-ATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCAC--ACAGGTTGTCG 3451
Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783
| |||||||||||| | |||||| |||| |||||| || |||| || |||
Sbjct 3452 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 3511
Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843
||| || || || ||||| || | || ||||||||| | || || || | |
Sbjct 3512 GCAACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTG 3571
Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903
|||| |||| | ||| ||| ||| || | | || | | || ||||| |
Sbjct 3572 CTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGA 3631
Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963
||| || | | ||| | | || || || |||||| ||| | || ||
Sbjct 3632 CCATCTACCATGCTGCCCTCACTGCTTCGGTGCAGCTGGCCA---AGGAGGAGGGTCCCT 3688
Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
|| | ||| || || ||| |||| ||| | ||||||||| | ||| ||
Sbjct 3689 ACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATG 3748
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGG 95081
||||||| || | || | |||||| ||| ||| | || | || | | |||||
Sbjct 3749 TGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCAGGGAGC--AGGTCAAGGAGCACGG 3806
Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141
| ||| ||||| | ||||| ||||| || ||| || |||||||||| ||
Sbjct 3807 CATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGG 3866
Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201
||||||||||| ||||| || | |||||||||| | ||| | | || || ||||| ||
Sbjct 3867 CAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGG 3926
Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGG--TGT-GT 95257
|| |||| ||| ||||| || || ||||| || | | |||| ||| ||
Sbjct 3927 CGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGAC-ATGGGCCTGTGGT 3985
Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317
|| || || | || |||| | | | || ||||| ||| |||||||||||||
Sbjct 3986 CGGATGCCA---TGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCA 4042
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| || || | || ||||||| |||||||||||||| |||||||| ||||||||
Sbjct 4043 ACATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGC 4098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494562433512120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |