Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4116 122 1e-22 >seq4116 Length=4278 Score = 122 bits (134), Expect = 1e-22 Identities = 432/658 (66%), Gaps = 24/658 (4%) Strand=Plus/Minus Query 203868 CGGCAGGCCTGC-TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTAC 203926 |||||| ||||| ||| ||| ||||||||||| ||||| ||||| || ||| ||| Sbjct 4264 CGGCAG-CCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCA 4206 Query 203927 ATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGG 203986 | ||||||| | | |||| || | ||||||| |||||| ||||| || |||||| Sbjct 4205 AAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGG 4146 Query 203987 CTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAA--TGGTCTTCTGCGAA 204043 || || ||| ||||| || || || || ||||| | | | ||| ||||||| Sbjct 4145 GACTGATCAATG-AAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGG--CGCTGCGAA 4089 Query 204044 ATCTCCCACACCGTCTTGAACACGTCTCTGGTGT-GTTGAGGCACATCTT-CCCACGTCC 204101 |||||||| || |||||| | | | | || | | | || || || | || | Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGG---ATGTTGGGGATGTTC 4032 Query 204102 T-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAAC 204160 | ||| || ||||| ||||| || | || | || | | ||| ||||| ||||| Sbjct 4031 TGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATG 3972 Query 204161 CTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCT 204220 | || ||| | ||| |||||||| || ||| || || || | || || | Sbjct 3971 TCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGG 3912 Query 204221 CGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCG 204280 || | | | |||| |||| | || ||||| |||||||||||| | ||||| | Sbjct 3911 CGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAA 3852 Query 204281 GTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACC 204340 || ||||| || ||||| || || || ||||| |||||| | |||| | | || | Sbjct 3851 GTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGA-C 3793 Query 204341 CTGCGCTTCAGAGAGGT----CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTC 204396 |||| || ||||| |||||| | || || ||||| ||||||||| Sbjct 3792 CTGC---TCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTC 3736 Query 204397 GAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTC 204456 |||||| | || || | | | | || ||||||| | || | || || ||||| Sbjct 3735 GAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTC 3676 Query 204457 TTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | |||||| |||| ||| || | | ||| || ||| |||||||| |||||||| Sbjct 3675 CTTGGCCAGC-TGCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTG 3619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794896804378320