Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 122 1e-22
>seq4116
Length=4278
Score = 122 bits (134), Expect = 1e-22
Identities = 432/658 (66%), Gaps = 24/658 (4%)
Strand=Plus/Minus
Query 203868 CGGCAGGCCTGC-TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTAC 203926
|||||| ||||| ||| ||| ||||||||||| ||||| ||||| || ||| |||
Sbjct 4264 CGGCAG-CCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCA 4206
Query 203927 ATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGG 203986
| ||||||| | | |||| || | ||||||| |||||| ||||| || ||||||
Sbjct 4205 AAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGG 4146
Query 203987 CTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAA--TGGTCTTCTGCGAA 204043
|| || ||| ||||| || || || || ||||| | | | ||| |||||||
Sbjct 4145 GACTGATCAATG-AAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGG--CGCTGCGAA 4089
Query 204044 ATCTCCCACACCGTCTTGAACACGTCTCTGGTGT-GTTGAGGCACATCTT-CCCACGTCC 204101
|||||||| || |||||| | | | | || | | | || || || | || |
Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGG---ATGTTGGGGATGTTC 4032
Query 204102 T-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAAC 204160
| ||| || ||||| ||||| || | || | || | | ||| ||||| |||||
Sbjct 4031 TGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATG 3972
Query 204161 CTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCT 204220
| || ||| | ||| |||||||| || ||| || || || | || || |
Sbjct 3971 TCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGG 3912
Query 204221 CGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCG 204280
|| | | | |||| |||| | || ||||| |||||||||||| | ||||| |
Sbjct 3911 CGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAA 3852
Query 204281 GTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACC 204340
|| ||||| || ||||| || || || ||||| |||||| | |||| | | || |
Sbjct 3851 GTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGA-C 3793
Query 204341 CTGCGCTTCAGAGAGGT----CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTC 204396
|||| || ||||| |||||| | || || ||||| |||||||||
Sbjct 3792 CTGC---TCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTC 3736
Query 204397 GAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTC 204456
|||||| | || || | | | | || ||||||| | || | || || |||||
Sbjct 3735 GAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTC 3676
Query 204457 TTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
| |||||| |||| ||| || | | ||| || ||| |||||||| ||||||||
Sbjct 3675 CTTGGCCAGC-TGCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTG 3619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794896804378320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |