Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 251 9e-62
seq2597 132 6e-26
seq687 91.5 2e-13
>seq4116
Length=4278
Score = 251 bits (278), Expect = 9e-62
Identities = 973/1509 (64%), Gaps = 51/1509 (3%)
Strand=Plus/Plus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604
|| ||||| ||||||| || ||| | |||||||| |||| || |||| | |
Sbjct 2461 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 2519
Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664
|| || ||| ||||| ||||||| || | |||| ||| || || ||||||||
Sbjct 2520 TGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGA 2579
Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724
||| ||||||| ||| || |||||| | | |||| ||| || | || ||
Sbjct 2580 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAATTCTTCACCCATGCCTCCCCCAC 2639
Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784
||||||||| |||||||| || || || ||||| || ||||| | | | ||
Sbjct 2640 CCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAA 2699
Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844
||||| || | || ||||| | ||||||| |||||| ||||| |||
Sbjct 2700 AGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGAT 2759
Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904
||| ||||||||||| || || |||| || | |||| ||| || ||
Sbjct 2760 GGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGG 2819
Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964
||| || ||| || | ||| | | || |||||||| || || ||| ||| || ||
Sbjct 2820 TACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCG 2879
Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCC 112018
|| || |||| | ||| |||| || || | || |||| ||||||||
Sbjct 2880 GTACGTCGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCC 2936
Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078
|||||||| ||| || | ||||||||||| |||| ||||| || | |||||||
Sbjct 2937 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 2996
Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138
|| |||||| || ||| |||||||||||||| ||||||||||||||| | || ||
Sbjct 2997 CCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGA 3056
Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197
| ||| || | ||| | ||| | ||||| || || |||||||| |||| |||
Sbjct 3057 GAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTA 3116
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251
| || |||||||| || || || ||| |||||| ||| | | | |||| ||
Sbjct 3117 T-GGCGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGA 3175
Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311
| || || |||| || | ||| | || || ||| || | || |||||||| |
Sbjct 3176 CCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCG 3229
Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371
| | || | ||||| ||||| ||| ||| |||| ||||| || || ||||| |||
Sbjct 3230 GCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 3289
Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431
| ||| || ||||| ||||| || || || | || | | | ||||||
Sbjct 3290 GCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGG 3349
Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491
||||| || ||||| || || | || || || | || || || || | ||
Sbjct 3350 TTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGA 3404
Query 112492 CATTTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545
||| |||| | || | ||||| || || | |||| ||||| |
Sbjct 3405 TGCTTG-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGA 3463
Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 112605
|||| |||| || || ||||| ||| | ||||| || || ||| |||
Sbjct 3464 ACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGAC 3523
Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCAC 112664
|||| || |||||| | |||||||| ||||| || |||| ||| || || || || ||
Sbjct 3524 ACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CAT 3581
Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723
|| ||| || || ||| || || |||| || || || ||||| || || ||
Sbjct 3582 GCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 3641
Query 112724 CGCCGCTCTTGAGGCGAGTTCGG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780
|| || || || ||||| || |||| ||| || ||||| || |||||
Sbjct 3642 TGCTGCCCTCACTGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTT 3698
Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 112840
|||| ||||| || || | || | || || || || |||| |||| |||| | |
Sbjct 3699 CAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCT 3756
Query 112841 GCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898
|| | || |||||||| |||| ||| | |||||||| | || |||| |||
Sbjct 3757 TCTGACCTCTGGGACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAAC 3816
Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958
||||| || | || || ||||| || ||| || | || ||| |||| || || ||
Sbjct 3817 AGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAG 3876
Query 112959 TGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 113018
||||| || || ||||| | |||||||| | | | | |||||| || ||||| |
Sbjct 3877 TGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAG 3936
Query 113019 ATTGTCAAC 113027
| ||||||
Sbjct 3937 GTCGTCAAC 3945
>seq2597
Length=5433
Score = 132 bits (146), Expect = 6e-26
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106
||||| |||| || || ||||| ||| | | ||| | | ||||| | ||||| |
Sbjct 3644 CTCATTGACACCTACATCAAGGAGCCAGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 3702
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165
|| | || ||||| | ||||| || || ||||| || ||| | | ||||
Sbjct 3703 GACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 3762
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| |
Sbjct 3763 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 3821
Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285
|| |||| | | || | |||||||||||||| || |||||||| || || ||| |
Sbjct 3822 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 3881
Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||||| ||||||||||||||||| || ||| || |||||
Sbjct 3882 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 3927
>seq687
Length=10136
Score = 91.5 bits (100), Expect = 2e-13
Identities = 302/461 (66%), Gaps = 18/461 (4%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
|||||||| || || || || | | || | || || ||||| | || || || ||
Sbjct 9008 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTGGTACCG 8949
Query 15945 GCGATGACAACAATACCTGTTTC--GTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002
|| | ||| |||| |||| | | | | | ||||| |||||||| |||| || |||||
Sbjct 8948 GCCAGGACGACAA--CCTGCTCCCGGGTGTTGAAACCGTCCATCTCGGTCAGAATCTGGT 8891
Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC---GTTGCTTTC 16059
| | ||| ||||| || || || | | ||| | |||| || || ||
Sbjct 8890 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAAACCCCGGCCACTCTCCTGTCGCGCTC 8831
Query 16060 ---CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTT 16116
| | ||| || |||||||| || |||| |||||| || || | || | |
Sbjct 8830 GACCAATGGCGTCGATCTCATCGATAAAGATGATGCAAGGAGCGTTCTTACGGCCTTCGG 8771
Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176
| || || || || ||||| | || ||||||||||||||||| || || | |
Sbjct 8770 CGAACAGGTCTCGCACACGGGAAGGACCAACACCAACAAACATCTCGACGAATTCAGAAC 8711
Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235
|| ||| || | ||||||||| ||| || || || | || |||||| | |||
Sbjct 8710 CGCTCACACTGAA-GAAGGGGACTCCAGACTCGCCAGCTGTAGCCTTGGCGAGCAATGTC 8652
Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 16293
||||||||||| || || || || | ||| ||||| ||||||||||| || ||||
Sbjct 8651 TTACCCGTACCAGGGGGGCCAGCCAGAATGGCTCCTCGGGGAATCTTGGCACCGAGCTTC 8592
Query 16294 -CAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333
|||| | |||| || ||||| || || ||||| |||
Sbjct 8591 TCAAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTC 8554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620540681997840
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