Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq687 138 1e-27 seq2597 95.1 1e-14 >seq687 Length=10136 Score = 138 bits (152), Expect = 1e-27 Identities = 318/466 (68%), Gaps = 26/466 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||| || || || || || | | || | || || ||||| | ||||| ||| || Sbjct 9008 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTGGTACCG 8949 Query 11563 GCAATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| |||| || | || | ||| |||||||||||| || || |||| ||||| Sbjct 8948 GCCAGGACGACAA--CCTGCTCCCGGGTGTTGAAACCGTCCATCTCGGTCAGAATCTGGT 8891 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC--- 11677 | | ||| || ||||| |||||| | ||| || ||| || || || | Sbjct 8890 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAAACC-CCGGCC--ACTCTCCTGTCGCG 8834 Query 11678 --CGACA----GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731 |||| ||||| ||||||||||| || | ||| || || ||| ||| | | Sbjct 8833 CTCGACCAATGGCGTCGATCTCATCGATAAAGATGATGCAAGGAGCGTTCTTACGGCCTT 8774 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 |||| || || || ||||| | |||||||| || |||||||| ||||| | | Sbjct 8773 CGGCGAACAGGTCTCGCACACGGGAAGGACCAACACCAACAAACATCTCGACGAATTCAG 8714 Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || | ||||||| |||||| || |||||| ||||| | || ||||| | Sbjct 8713 AACCGCTCA-CACTGAA-GAAGGGGACTCCAGACTCGCCAGCTGTAGCCTTGGCGAGCAA 8656 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--A 11907 ||||||||||||||||| | ||||| |||| ||| || ||||| ||||||||||| Sbjct 8655 TGTCTTACCCGTACCAGGGGGGCCAGCCAGAATGGCTCCTCGGGGAATCTTGGCACCGAG 8596 Query 11908 CTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 |||| |||| | ||| |||| ||| |||||| ||||| |||| Sbjct 8595 CTTCTCAAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 8553 >seq2597 Length=5433 Score = 95.1 bits (104), Expect = 1e-14 Identities = 198/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || || || |||||||||||||| || ||| || ||||||||||| || Sbjct 3915 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCA 3856 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| ||| || |||||||| ||||| || Sbjct 3855 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCA 3796 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683 || || |||| ||||||| ||| ||||| |||| |||||| || ||| || || Sbjct 3795 GCAAAGGCGACGAGACGCTGAGC-AAAGGACGAGTTCTTGTCCTGGATCCATCGGATGGC 3737 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGTTGCTTCT 119742 ||||| |||||| || ||||||| || | ||||| | ||| | || | ||| Sbjct 3736 CCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTC- 3678 Query 119743 TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791 || ||| ||||| || || | |||||||| ||||||||||| Sbjct 3677 GTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 3629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588784604886600