Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 455 6e-123
seq2597 206 5e-48
>seq4116
Length=4278
Score = 455 bits (504), Expect = 6e-123
Identities = 1243/1870 (66%), Gaps = 94/1870 (5%)
Strand=Plus/Minus
Query 212568 GGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCC 212624
||| |||| ||||||| || || || ||||||||||| ||||| ||||| ||| |
Sbjct 4271 GGACCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTT---C 4215
Query 212625 CAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTG 212683
|||||| | |||||| |||| ||| |||| | || | |||| | | |||
Sbjct 4214 CAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGTGGGGTCCTTCATGTG 4162
Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743
| | ||| |||||||| ||| || ||||| | | | ||| || |||||
Sbjct 4161 G---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCAT 4111
Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803
| | || | | ||| || | |||||| ||||||||| ||| | |||| || |
Sbjct 4110 CTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGC 4051
Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CA 212859
|||| | |||||||||||| | || || || | | | || | | | | ||
Sbjct 4050 GGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAATGATTCGGTTTTTCA 3995
Query 212860 TGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCT 212919
|| | || ||| |||||| || | ||| ||||| ||| |||||||| | ||
Sbjct 3994 TGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCT 3935
Query 212920 GGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCT 212979
|||| || || | ||| || | | |||||| | ||| || ||||| ||||||| || ||
Sbjct 3934 GGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACT 3875
Query 212980 CGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGT 213039
||||||| ||||| ||||| | ||| ||||| || ||||| || || | ||| |||||||
Sbjct 3874 CGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGT 3815
Query 213040 TCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTCCCATCTGCCAGAC 213098
| | | |||||||| || | || || | ||| |||||||||| | ||||
Sbjct 3814 TGCGAATGCCGTGCTCCTTGACCTGCTCCCTGAGGTTCT-CCCAGTCCCAGAGGTCAGA- 3757
Query 213099 AGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA----CGGG 213154
||| |||||| ||||||||||| ||||| | || || |||| ||||
Sbjct 3756 AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC----CTCAGAGGCGGG 3709
Query 213155 GCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCA-GGACGCCTGCA 213213
||||| | | | ||||||||| || | |||||||||||||| ||| || || |
Sbjct 3708 AGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGA 3650
Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273
||||||| | ||||||||| || || |||| | ||||||||| ||||| || |||
Sbjct 3649 GGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACT 3590
Query 213274 TGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGG 213333
||| ||||| || |||| ||||||| || |||||||| || | || ||||
Sbjct 3589 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGG 3530
Query 213334 GTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATG 213392
||| ||||| || ||| ||| |||| ||| | ||||| ||| ||||||
Sbjct 3529 GTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGTGGTTCACGTCGATA 3471
Query 213393 ATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAAC 213452
||| |||| |||||||| | | || | ||||| | | || ||| || |||
Sbjct 3470 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA---ACTTCTG---GAAG 3417
Query 213453 ACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAA 213506
| |||| | ||| | | ||| ||||||||| | || ||||||||
Sbjct 3416 TCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAG 3357
Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
|| || ||||| | || | | |||||| || ||||||||||| || ||| || |||
Sbjct 3356 ACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGG 3297
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTA 213625
|||||||||||||||| ||| ||| ||||| | |||| ||||||||||||||| |
Sbjct 3296 ATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 3238
Query 213626 GGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTG 213683
|||| |||||||| ||| | | | || | |||| |||||| | | ||||||
Sbjct 3237 GGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGAGCTTCTGGGCCTT- 3181
Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCG 213743
|| | || | | | || ||| |||| |||||| || | | ||| ||
Sbjct 3180 --CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCC 3123
Query 213744 TGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
| ||| || | |||| || || || ||||||||||||| ||||||| |||
Sbjct 3122 TCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCG 3063
Query 213804 -TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862
|| |||| ||| | || |||||| || || || | ||| || || ||||||||| |
Sbjct 3062 TTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCG 3004
Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922
|| | ||| ||| || ||| |||||||| || || || ||||||| || ||
Sbjct 3003 GGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGC 2944
Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979
|||||| ||||| | ||||||||||||||| || | || | ||||| |||||||| ||
Sbjct 2943 GTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGAC 2884
Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039
|| ||| ||||||||| || || | ||| | |||||||| |||||
Sbjct 2883 GTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTT 2824
Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGAGCCCTATGCC 214096
||| || || || || ||||| | ||| | | ||| | | | || || || ||
Sbjct 2823 GGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACGTTCAGGCCGATACC 2767
Query 214097 ACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCT 214156
||| || ||||||||||||||| ||| | | | ||| || || || | |||||
Sbjct 2766 ACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCT 2707
Query 214157 GTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTT 214216
||| ||| | | || | || |||||| || ||||| ||| || | |||| ||
Sbjct 2706 GTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATT 2647
Query 214217 GAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAG 214276
||| || |||||| ||||||| | | || ||| | || | || |||||||||||||
Sbjct 2646 GAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCTCGACATCAGGTTGTAGGTCTCCAG 2587
Query 214277 GACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCATCAGCATGTGCTGGG 214335
||| || |||| ||| | || | || | ||| | |||||||||||
Sbjct 2586 GACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGG 2528
Query 214336 GCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGA 214392
| | ||| | || ||| | |||||| |||||||| ||||| ||||||||||
Sbjct 2527 GACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGA 2471
Query 214393 ACCCAAAGTA 214402
| ||||||||
Sbjct 2470 AGCCAAAGTA 2461
>seq2597
Length=5433
Score = 206 bits (228), Expect = 5e-48
Identities = 487/729 (67%), Gaps = 11/729 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 4219 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 4160
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 4159 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 4101
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||||||| | ||||||||| | ||||
Sbjct 4100 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 4041
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | |||| || || ||||||| ||| || ||||| || | || |
Sbjct 4040 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 3981
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||| ||||
Sbjct 3980 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 3924
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || ||||| || ||||||| ||||||| ||| || |||||||
Sbjct 3923 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 3864
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | || ||||||||| ||||
Sbjct 3863 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 3804
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| ||| | || | || || | ||||||||| ||||||
Sbjct 3803 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 3744
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| ||| || || || ||||| ||||| |||||| |
Sbjct 3743 GGATGGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGT 3684
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | ||| ||| | ||||| | |||| ||| | ||| |||| |
Sbjct 3683 AGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 3627
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | |||||| | ||| |
Sbjct 3626 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 3567
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | || ||||| ||||| || || || || ||||| ||||
Sbjct 3566 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 3507
Query 48555 AGGCAAGGA 48563
|||| ||||
Sbjct 3506 AGGCGAGGA 3498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931230086772480
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