Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 197 2e-45
>seq4116
Length=4278
Score = 197 bits (218), Expect = 2e-45
Identities = 1043/1638 (64%), Gaps = 47/1638 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || | |||||||| || || || ||||| ||||
Sbjct 2527 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 2586
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 75329
||||||| ||| || |||||| || | | |||| || || | || |||||||
Sbjct 2587 CTGGAGACCTACAACCTGATGTCG--AGCAAATTCTTCACCCATGCCTCCCCCACCCTCT 2644
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||||||||||||| || || ||| ||||| |||||||| ||| || || ||||
Sbjct 2645 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACATGAAAGAGG 2704
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | ||||| |||| ||||| | | ||||| ||||| ||| ||| |
Sbjct 2705 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 2764
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| ||||| || || || |||| | | |||| | ||| || || || |
Sbjct 2765 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 2824
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || | ||| | | || |||||||| || || ||| ||| || || || |
Sbjct 2825 ACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 2884
Query 75570 TAAATCAAGCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| | | || | ||| | || | || || | || ||||| | || || |||||
Sbjct 2885 TCGA-CCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCAC 2943
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|| ||| || | ||||||||||| | || ||||| || | || |||| ||
Sbjct 2944 GCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCC 3003
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| || || || | || |||||||| || || ||||||||||| || ||| ||
Sbjct 3004 CGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAAC 3063
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGA 75804
||| | ||| | || | ||||| || || || ||||| ||||| || | || ||
Sbjct 3064 GGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGCGA 3122
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATGCGACTGT 75861
|||||| || || || ||| ||||||||| ||| ||| | | ||| ||| |
Sbjct 3123 GGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAA---GACCAT 3179
Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
|| | | || | | ||| | || || ||| | | ||||| ||||| || | || |
Sbjct 3180 -GAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCT 3238
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
||||| |||||||| || ||| ||||| ||||| ||||| |||| || |||
Sbjct 3239 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 3298
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
||||| ||||| ||||| || ||| | |||||| | |||||| ||||| |
Sbjct 3299 GTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCTGTCT 3358
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTTTG 76097
|||| | || || | ||||| || || ||| | || || || || | ||
Sbjct 3359 GCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCATCAACTACGATGATGCTTGC---TATG 3415
Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157
| | | || | || || ||||| || |||| || || ||| | | || |
Sbjct 3416 ACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGGATTATCG 3475
Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
|| || || || ||| | || || || || ||||||||| |||| ||||
Sbjct 3476 ACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGACCCATTG 3535
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT-GATTC 76275
|| | ||||| || ||||| || |||| || || | || ||| | || ||| || ||
Sbjct 3536 GTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGC-ATGCCTTTCGAGTC 3593
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
|| || ||| | || | ||||| || ||||| || || || ||||
Sbjct 3594 TCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTGCCCTCAC 3653
Query 76336 GGCGAGTT--GTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392
|| || ||| | |||| | | | ||| |||| || || |||| |||||
Sbjct 3654 TGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCC 3710
Query 76393 CGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTAC 76450
||| || | || | || ||||| || |||| |||| ||||| || || | ||
Sbjct 3711 CGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGAAGCC-TTCTGACCTCTGG 3768
Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510
|||||||| |||| ||| | |||||||| | || |||| |||||||| || |
Sbjct 3769 GACTGGGAGAACCTCAGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCTGCTGCTT 3828
Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570
|| || ||||| || ||| || | || ||| |||| || || || ||||| || ||
Sbjct 3829 GCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCT 3888
Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630
||||| | |||||||||| | | | |||||| || ||||| | ||||||
Sbjct 3889 TACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGTCAACCCC 3948
Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TC 76687
|| |||| ||||| | || || || ||||| | | ||||| | | ||
Sbjct 3949 TGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGGTCGGATGCCATGAAAAACCGAATC 4008
Query 76688 A-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746
| || || | | |||||||| || || ||| | | ||||| | || |||||
Sbjct 4009 ATTGCCGAGAAC----GGTTCCATCCAGAACATCCCCAACATCCCCGCCGAGGTCAAGGC 4064
Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806
|||||| || || ||||| || | | | ||| || | ||||| || || ||
Sbjct 4065 CCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGTCGTTCAGATGGCTGCCGACCG 4124
Query 76807 TGGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 4125 AGGTGCCTTCATTGATCA 4142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596375737251360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |