Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2597 188 1e-41
seq1832 141 1e-27
seq969 125 1e-22
seq2914 113 7e-19
seq4116 100 5e-15
seq1314 91.5 2e-12
seq9392 86.0 1e-10
>seq2597
Length=5433
Score = 188 bits (208), Expect = 1e-41
Identities = 243/331 (73%), Gaps = 11/331 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| |||||
Sbjct 3910 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 3851
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| ||||||||||| ||
Sbjct 3850 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 3794
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| ||||||| |||| ||||| | | | || | | |||||| || ||
Sbjct 3793 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 3737
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575
||| || ||||| || | | |||| | || || |||||| ||||||| ||| |
Sbjct 3736 CCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 3677
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | | || ||||||| ||||||||| |||||||||||||||||||| ||||||||||
Sbjct 3676 TTGAG-CTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 3618
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || |||||||||||| || |||||
Sbjct 3617 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 3587
Score = 147 bits (162), Expect = 3e-29
Identities = 190/259 (73%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| ||||
Sbjct 4231 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 4172
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||||| |||||| | ||| ||||||| | | |||| ||||||| |||||
Sbjct 4171 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 4112
Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
||||| || ||||||||||||||||| || |||||||| ||||||| ||||||||
Sbjct 4111 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 4054
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| || || ||| || | |||| | | ||||| | ||| || ||||||
Sbjct 4053 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 3994
Query 794130 TCGATGATGATCTGCCTGG 794148
||| ||||||| | |||||
Sbjct 3993 TCGGTGATGATGT-CCTGG 3976
>seq1832
Length=6077
Score = 141 bits (156), Expect = 1e-27
Identities = 188/260 (72%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||||||| || ||||||| |||||||||||||| || |||||||||| || || |||
Sbjct 153 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 212
Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300
|| | || |||| |||||||| || |||||| |||||||||| ||| |||||||||
Sbjct 213 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 272
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| | || || | ||||||||| ||| | | ||||||| |||| || || |
Sbjct 273 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 332
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420
|||||||| || | | || | || || |||||| ||| ||| ||| |||
Sbjct 333 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 392
Query 2019421 TTATCGACGCCGAAAAGGTC 2019440
||||||| || |||||||||
Sbjct 393 TTATCGAGGCGGAAAAGGTC 412
>seq969
Length=8269
Score = 125 bits (138), Expect = 1e-22
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| ||||||
Sbjct 8062 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 8003
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| || || ||||| || |||||||
Sbjct 8002 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 7954
>seq2914
Length=5522
Score = 113 bits (124), Expect = 7e-19
Identities = 80/92 (87%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 3968 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 4027
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||||||| || | |||||||||||| ||||
Sbjct 4028 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 4059
>seq4116
Length=4278
Score = 100 bits (110), Expect = 5e-15
Identities = 177/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || |||||||| | ||||||||
Sbjct 2892 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 2833
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| || | |||
Sbjct 2832 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 2773
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| ||||||||| | || || | || || || || || || |||||
Sbjct 2772 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 2713
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | |||||||| | ||| ||||| || || || || | | || ||
Sbjct 2712 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 2653
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| |||||
Sbjct 2652 AGCATTGAAGAGGGTGGG 2635
Score = 96.9 bits (106), Expect = 5e-14
Identities = 281/433 (65%), Gaps = 8/433 (2%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642
||||||||| || |||| | | | ||||||||||||||| ||||||||| | |||
Sbjct 3321 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 3263
Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702
|| | |||||||| |||||| |||| || |||||| |||||||| || |||||
Sbjct 3262 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 3203
Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759
| |||| | | | || || |||| | || | ||||
Sbjct 3202 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 3146
Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819
| || || || || | |||| | ||| ||| ||| ||||| |||| |
Sbjct 3145 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 3086
Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879
| || | ||| | |||||| ||| || | || || ||| || || ||| |||
Sbjct 3085 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 3026
Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939
| || | || || ||||| || ||| ||||||||||||||||||||| |||||
Sbjct 3025 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 2966
Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999
| || | || | || || |||||||| ||||| |||||| ||||||||| || |
Sbjct 2965 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 2906
Query 2072000 GCTTGCCGCCGCC 2072012
||||| ||| ||
Sbjct 2905 GCTTGTTGCCACC 2893
Score = 96.9 bits (106), Expect = 5e-14
Identities = 335/514 (65%), Gaps = 14/514 (3%)
Strand=Plus/Minus
Query 2069278 GCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTTGAGGCCGCGACGCCACGCGTAG 2069337
||||||| | | || ||||| ||||||||||| ||||| |||||| | ||| ||
Sbjct 4265 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCA 4206
Query 2069338 GCGTGCATCGACGTGATGGACTCGGCATTCGGGACGGCA--CA-GTAGAGGTTGAGCGAC 2069394
|||||| ||||| || | | | | | | | || || || |||||| |||
Sbjct 4205 AAGTGCATGCTGGTGAT---CTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGAC 4149
Query 2069395 TGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGTCGATGGTCACGCGGTTGGAC 2069454
||| ||| || | ||| | |||||||| ||||| | | | | ||| | ||
Sbjct 4148 TGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAA 4089
Query 2069455 ACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGGCGGCACCTCGTCGTCATCAAAG 2069514
| |||||| ||||||||| | |||||||||| | |||||| | | | || |
Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCT-CGGCGGGGA-TGTTGGGGAT----G 4035
Query 2069515 CCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCCG 2069574
||| | || || | | | || |||| |||| | | | || |||||||||
Sbjct 4034 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCC- 3976
Query 2069575 CGCGCCATCATGCGC-TCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCAC 2069633
| | || || | | | || ||| | ||||||| || || ||||| | ||| ||
Sbjct 3975 CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGAC 3916
Query 2069634 GCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTG 2069693
|||||| |||||||||| ||| |||| | |||| ||||||||||||||||
Sbjct 3915 ACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTG 3856
Query 2069694 CGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCCGTACTGTCG 2069753
||| || |||| || ||||| | || | ||||| |||||| | ||||| ||
Sbjct 3855 CGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTT 3796
Query 2069754 CACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGG 2069787
||| || ||| ||| |||||||||||| ||
Sbjct 3795 GACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGG 3762
>seq1314
Length=7778
Score = 91.5 bits (100), Expect = 2e-12
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|||||||| || |||||| |||| || ||||||||||||| || || || ||||||
Sbjct 4138 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 4197
Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737
|||||||||||||| |||||| ||| | | ||||| ||||||
Sbjct 4198 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 4242
>seq9392
Length=1608
Score = 86.0 bits (94), Expect = 1e-10
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||| |||| |||||||||||| ||||| || ||||| ||| |||||||||| || |||
Sbjct 574 GTATTTGGCGACGGCCTTGGTTCCCTCAGACACGGCATGCTTGGCCAGTTCACCCGGCAG 515
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
||| ||||| || | ||||||||| || ||
Sbjct 514 GATGAGGCGGACAGAGGTCTGGATTTCTCG 485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913480980537683
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