Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2597 188 1e-41 seq1832 141 1e-27 seq969 125 1e-22 seq2914 113 7e-19 seq4116 100 5e-15 seq1314 91.5 2e-12 seq9392 86.0 1e-10 >seq2597 Length=5433 Score = 188 bits (208), Expect = 1e-41 Identities = 243/331 (73%), Gaps = 11/331 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| ||||| Sbjct 3910 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 3851 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || || ||| ||||| ||||||||||| || Sbjct 3850 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 3794 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| ||||||| |||| ||||| | | | || | | |||||| || || Sbjct 3793 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 3737 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575 ||| || ||||| || | | |||| | || || |||||| ||||||| ||| | Sbjct 3736 CCAGTCGGCCTTCTTGCGGATACAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 3677 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 | | | || ||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct 3676 TTGAG-CTGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 3618 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || |||||||||||| || ||||| Sbjct 3617 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 3587 Score = 147 bits (162), Expect = 3e-29 Identities = 190/259 (73%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || || || || ||| |||||| |||||||||||||| |||| Sbjct 4231 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 4172 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| |||||| | ||| ||||||| | | |||| ||||||| ||||| Sbjct 4171 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 4112 Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| || ||||||||||||||||| || |||||||| ||||||| |||||||| Sbjct 4111 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 4054 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||||| || || ||| || | |||| | | ||||| | ||| || |||||| Sbjct 4053 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 3994 Query 794130 TCGATGATGATCTGCCTGG 794148 ||| ||||||| | ||||| Sbjct 3993 TCGGTGATGATGT-CCTGG 3976 >seq1832 Length=6077 Score = 141 bits (156), Expect = 1e-27 Identities = 188/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240 ||||||| || ||||||| |||||||||||||| || |||||||||| || || ||| Sbjct 153 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 212 Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300 || | || |||| |||||||| || |||||| |||||||||| ||| ||||||||| Sbjct 213 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 272 Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360 | | || || | ||||||||| ||| | | ||||||| |||| || || | Sbjct 273 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 332 Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420 |||||||| || | | || | || || |||||| ||| ||| ||| ||| Sbjct 333 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 392 Query 2019421 TTATCGACGCCGAAAAGGTC 2019440 ||||||| || ||||||||| Sbjct 393 TTATCGAGGCGGAAAAGGTC 412 >seq969 Length=8269 Score = 125 bits (138), Expect = 1e-22 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| |||||| Sbjct 8062 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 8003 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| |||||||| || || ||||| || ||||||| Sbjct 8002 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 7954 >seq2914 Length=5522 Score = 113 bits (124), Expect = 7e-19 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 3968 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 4027 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| || | |||||||||||| |||| Sbjct 4028 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 4059 >seq4116 Length=4278 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| ||| ||||| || |||||||| | |||||||| Sbjct 2892 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCGTTGGA 2833 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 2832 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 2773 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || ||| ||||||||| | || || | || || || || || || ||||| Sbjct 2772 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 2713 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | |||||||| | ||| ||||| || || || || | | || || Sbjct 2712 AATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 2653 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||||| ||||| Sbjct 2652 AGCATTGAAGAGGGTGGG 2635 Score = 96.9 bits (106), Expect = 5e-14 Identities = 281/433 (65%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642 ||||||||| || |||| | | | ||||||||||||||| ||||||||| | ||| Sbjct 3321 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 3263 Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702 || | |||||||| |||||| |||| || |||||| |||||||| || ||||| Sbjct 3262 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 3203 Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759 | |||| | | | || || |||| | || | |||| Sbjct 3202 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 3146 Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819 | || || || || | |||| | ||| ||| ||| ||||| |||| | Sbjct 3145 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 3086 Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879 | || | ||| | |||||| ||| || | || || ||| || || ||| ||| Sbjct 3085 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 3026 Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939 | || | || || ||||| || ||| ||||||||||||||||||||| ||||| Sbjct 3025 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 2966 Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999 | || | || | || || |||||||| ||||| |||||| ||||||||| || | Sbjct 2965 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 2906 Query 2072000 GCTTGCCGCCGCC 2072012 ||||| ||| || Sbjct 2905 GCTTGTTGCCACC 2893 Score = 96.9 bits (106), Expect = 5e-14 Identities = 335/514 (65%), Gaps = 14/514 (3%) Strand=Plus/Minus Query 2069278 GCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTCTTGAGGCCGCGACGCCACGCGTAG 2069337 ||||||| | | || ||||| ||||||||||| ||||| |||||| | ||| || Sbjct 4265 GCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCA 4206 Query 2069338 GCGTGCATCGACGTGATGGACTCGGCATTCGGGACGGCA--CA-GTAGAGGTTGAGCGAC 2069394 |||||| ||||| || | | | | | | | || || || |||||| ||| Sbjct 4205 AAGTGCATGCTGGTGAT---CTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGAC 4149 Query 2069395 TGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCATGTCGATGGTCACGCGGTTGGAC 2069454 ||| ||| || | ||| | |||||||| ||||| | | | | ||| | || Sbjct 4148 TGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAA 4089 Query 2069455 ACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGGCGGCACCTCGTCGTCATCAAAG 2069514 | |||||| ||||||||| | |||||||||| | |||||| | | | || | Sbjct 4088 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCT-CGGCGGGGA-TGTTGGGGAT----G 4035 Query 2069515 CCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCCG 2069574 ||| | || || | | | || |||| |||| | | | || ||||||||| Sbjct 4034 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCC- 3976 Query 2069575 CGCGCCATCATGCGC-TCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCAC 2069633 | | || || | | | || ||| | ||||||| || || ||||| | ||| || Sbjct 3975 CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGAC 3916 Query 2069634 GCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTG 2069693 |||||| |||||||||| ||| |||| | |||| |||||||||||||||| Sbjct 3915 ACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTG 3856 Query 2069694 CGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCCGTACTGTCG 2069753 ||| || |||| || ||||| | || | ||||| |||||| | ||||| || Sbjct 3855 CGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTT 3796 Query 2069754 CACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGG 2069787 ||| || ||| ||| |||||||||||| || Sbjct 3795 GACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGG 3762 >seq1314 Length=7778 Score = 91.5 bits (100), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692 |||||||| || |||||| |||| || ||||||||||||| || || || |||||| Sbjct 4138 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 4197 Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737 |||||||||||||| |||||| ||| | | ||||| |||||| Sbjct 4198 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 4242 >seq9392 Length=1608 Score = 86.0 bits (94), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||| |||| |||||||||||| ||||| || ||||| ||| |||||||||| || ||| Sbjct 574 GTATTTGGCGACGGCCTTGGTTCCCTCAGACACGGCATGCTTGGCCAGTTCACCCGGCAG 515 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| ||||| || | ||||||||| || || Sbjct 514 GATGAGGCGGACAGAGGTCTGGATTTCTCG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913480980537683