Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 315 7e-81
seq2597 152 5e-32
seq7763 131 2e-25
seq6050 116 4e-21
seq4644 114 1e-20
>seq4116
Length=4278
Score = 315 bits (348), Expect = 7e-81
Identities = 1135/1751 (65%), Gaps = 51/1751 (3%)
Strand=Plus/Minus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109
|||||| ||| |||||||| || || ||||| || ||||| | || || | ||||
Sbjct 4151 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTG- 4093
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
| ||||||||| | |||||||| || ||||| | |||| ||| | ||||
Sbjct 4092 --CGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATG 4035
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
||| | || ||| | |||| || | || ||| | |||| | |||
Sbjct 4034 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCC 3975
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
| || | ||||| | || ||| | | || || ||||| |||||||| ||||| ||
Sbjct 3974 ATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 3915
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| ||| | || | |||| || | || || || ||||||||||||||| ||||||
Sbjct 3914 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 3855
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| || | || || ||||| || | |||||| |||||| | ||| | | ||
Sbjct 3854 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 3795
Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469
| | | | || | ||||||||||||| || || |||| ||||||||||||
Sbjct 3794 ACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCG 3735
Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529
|||| ||||| || ||||| ||||| | | | | ||| || || | | ||
Sbjct 3734 AACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCC 3675
Query 148530 GCCGCCAGTTCGCAGCTC-GCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588
||||| | ||| | || ||| || | | ||| || |||||| || ||| |
Sbjct 3674 TTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTT 3616
Query 148589 GTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644
||||||| | ||| | | | | ||| | ||||| ||||| | || || |
Sbjct 3615 GTTGAGCTCACGAGCCTCGGGAGAC----TCGAAAGGCATGCGCAGAGCAAGGAAAGCAT 3560
Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704
| ||||| ||||| || || || |||||||| |||||| |||||| | ||| ||
Sbjct 3559 CAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTT 3500
Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764
| | || |||||||| |||||| ||| ||| || ||||| || || |||| ||
Sbjct 3499 CCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTG 3440
Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TAC--GATGCATCGGTTCA 148818
| | | ||| | | || || || | | ||||| || |||| | ||
Sbjct 3439 TGACGTCGTGCAACTTCTGGAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCA 3380
Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878
||| | ||| || || ||||| || || |||||| ||||||| |||||| | ||||
Sbjct 3379 GGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCT 3320
Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938
||| ||| |||||| || ||| ||||| |||||| || |||||||||| |||||
Sbjct 3319 CGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 3260
Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AA 148996
| ||||||||| |||||| | || ||| || || ||||| || | ||| |
Sbjct 3259 AGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCAT 3200
Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTA 149050
| | || | ||| || ||| || || | |||||||| ||| ||| ||
Sbjct 3199 ACCAG--AGCTTCTGGGC-----CTTCATGGTCTT-GCGACCCTTGCCCGCCTTCTCATA 3148
Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108
| ||| | |||| |||||| ||||||| ||||| ||| | ||||||||||||| |
Sbjct 3147 CTTTTCGTAAAGAGCC--TCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCG 3090
Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168
| || |||||||| | ||| | |||| | | || |||||||| || ||||||||
Sbjct 3089 TTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 3030
Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228
| |||||| || | |||||||| || | || || ||| ||| ||||
Sbjct 3029 ATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 2970
Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288
|||| || | || | || |||||||| ||||||| ||| | || | || ||
Sbjct 2969 AGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 2910
Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345
||| ||||| ||||||||||||| || | ||||||| || || |||| |||
Sbjct 2909 GGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATG 2850
Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404
|| | || ||| || ||||| ||| ||| ||| | ||| || || |
Sbjct 2849 GGGGTGACACCGTTGGAGGTACCGTTGGTACCAGC-GATGTAAGAGCCAGTGGCACGGAT 2791
Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463
| ||| ||||| | |||||| || ||||| | ||| ||||| || ||| ||
Sbjct 2790 TCGGTGGACGTTCAGGCCGATACCACCCGCCAT-CTTGGAGATCATGGCACAGGTCTTGA 2732
Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523
| || || || ||||| |||||||| |||||| | ||| ||||| ||| |||
Sbjct 2731 GAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACA 2672
Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT-C 149582
|| || | || || || ||| | ||||||| ||| || || || |||| |
Sbjct 2671 GCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGC 2612
Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642
| | ||||| | ||| | ||| || || || || || || || || |||||| |
Sbjct 2611 TCG-ACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACA 2553
Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702
| || ||||| | ||| ||||| || ||||| | | ||| |||| ||||| | |
Sbjct 2552 GACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGG 2493
Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCA 149762
||| || || |||||| |||||||||||| ||| | ||||| ||| | | | ||
Sbjct 2492 TAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACA 2433
Query 149763 ATGGCGGCGTC 149773
||||| | |||
Sbjct 2432 ATGGCCGAGTC 2422
>seq2597
Length=5433
Score = 152 bits (168), Expect = 5e-32
Identities = 343/511 (67%), Gaps = 17/511 (3%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 4219 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 4160
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | || || || ||| | ||| | ||||| ||
Sbjct 4159 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAG 4100
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || || ||||| ||||||| |||| | ||||||||||| |||| ||
Sbjct 4099 GCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGC 4040
Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590
|| | ||| || | ||||||| ||||||| || || || ||| ||| |
Sbjct 4039 GCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTC 3980
Query 120591 GAGCATAG------TG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643
| || || |||| ||| |||| | | | | || | || | |||
Sbjct 3979 CTGGATGACCTGCTTGCTGGCACGGCC-CTTGAGGTGG----GAGT---GGAGGA--GGC 3930
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| |||||||| ||||| || |||||||| || || || ||||||||| ||| |||||||
Sbjct 3929 ATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 3870
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
| ||||||| ||| | |||||| |||| |||| ||||||| || ||||| |
Sbjct 3869 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 3810
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823
||||| ||| ||||||||||| | |||| || || | || ||||| | ||
Sbjct 3809 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGA 3750
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCG 120854
|||| |||||||| |||||||| |||||
Sbjct 3749 TCCATCGGATGGCCCAGTCGGCCTTCTTGCG 3719
>seq7763
Length=1926
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||| ||| ||||| || ||||| |||| || ||| | | | ||||||||||||||||
Sbjct 1034 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 1092
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| |||||||||||||| |||||||| |||||||| |||||| ||
Sbjct 1093 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 1152
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || || || || || |
Sbjct 1153 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGG 1212
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 1213 TCTTGACAAAGATCTGCAT 1231
>seq6050
Length=2754
Score = 116 bits (128), Expect = 4e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||||||||| || |||||||| ||||||
Sbjct 2459 TCCTCCAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 2518
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | |||| ||||| | || ||| || |||| ||||| |
Sbjct 2519 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 2578
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652
|| ||||| ||||| || || ||||||
Sbjct 2579 GTCTTGCCCGTCAGGGTCTTCACGAAA 2605
>seq4644
Length=3541
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || ||||| |||| | || || || ||||||||||||||||
Sbjct 2328 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 2385
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| ||||| || || ||||| |||||||||||||| |||||| |
Sbjct 2386 CGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATT 2445
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||||| | ||||| || | ||||| || || ||||| || |
Sbjct 2446 TCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTCTTTCCGGTGAGGG 2505
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 2506 TCTTGACGAAGATCTGCAT 2524
Score = 111 bits (122), Expect = 2e-19
Identities = 139/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| |||||||| ||| | | || | | | ||||| |||||||||||
Sbjct 2556 GTTGACTCCTTCTGAATATTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 2614
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| ||||| || || ||||| || |||||| |||
Sbjct 2615 GGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTT 2674
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||||| | |||||| |||| ||||| || || || || || ||
Sbjct 2675 GACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGT 2734
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 2735 CTTGACGA 2742
Score = 109 bits (120), Expect = 5e-19
Identities = 132/177 (75%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||||||| | ||| | | | ||||| ||||||||||
Sbjct 2830 GGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCAAGCTGCTTGC 2888
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| || |||||||||||||| |||||||| |||||||| ||||| ||
Sbjct 2889 CGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACT 2948
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
||| | || | || || | || ||| || |||| ||| | ||| ||||| ||||
Sbjct 2949 TGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGTCA 3005
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| ||| || ||| ||| ||| || ||||
Sbjct 2093 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCTTCCAGCT 2151
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || || ||||||||||| || |||||||| |||||||| ||||
Sbjct 2152 GCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCT 2211
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| || ||| | | ||| || || | |||| ||| || || |
Sbjct 2212 TGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGTGATGGTCTTTCCAG 2271
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || || ||||||||
Sbjct 2272 TGAGAGTCTTGACAAAGATCTGCAT 2296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483263706368280
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