Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4116 315 7e-81 seq2597 152 5e-32 seq7763 131 2e-25 seq6050 116 4e-21 seq4644 114 1e-20 >seq4116 Length=4278 Score = 315 bits (348), Expect = 7e-81 Identities = 1135/1751 (65%), Gaps = 51/1751 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTTT 148109 |||||| ||| |||||||| || || ||||| || ||||| | || || | |||| Sbjct 4151 GACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTG- 4093 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || ||||| | |||| ||| | |||| Sbjct 4092 --CGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATG 4035 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || ||| | |||| || | || ||| | |||| | ||| Sbjct 4034 TTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCC 3975 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | || | ||||| | || ||| | | || || ||||| |||||||| ||||| || Sbjct 3974 ATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACA 3915 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || || || ||||||||||||||| |||||| Sbjct 3914 CGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGC 3855 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | || | || || ||||| || | |||||| |||||| | ||| | | || Sbjct 3854 GAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTG 3795 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 | | | | || | ||||||||||||| || || |||| |||||||||||| Sbjct 3794 ACCTGCTCCCTGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACATTCCACATGTCG 3735 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 |||| ||||| || ||||| ||||| | | | | ||| || || | | || Sbjct 3734 AACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCC 3675 Query 148530 GCCGCCAGTTCGCAGCTC-GCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 ||||| | ||| | || ||| || | | ||| || |||||| || ||| | Sbjct 3674 TTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTT 3616 Query 148589 GTTGAGCA---GCGCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 ||||||| | ||| | | | | ||| | ||||| ||||| | || || | Sbjct 3615 GTTGAGCTCACGAGCCTCGGGAGAC----TCGAAAGGCATGCGCAGAGCAAGGAAAGCAT 3560 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 | ||||| ||||| || || || |||||||| |||||| |||||| | ||| || Sbjct 3559 CAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTT 3500 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764 | | || |||||||| |||||| ||| ||| || ||||| || || |||| || Sbjct 3499 CCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTG 3440 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTA-CTTG--TCATC-TAC--GATGCATCGGTTCA 148818 | | | ||| | | || || || | | ||||| || |||| | || Sbjct 3439 TGACGTCGTGCAACTTCTGGAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCA 3380 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 ||| | ||| || || ||||| || || |||||| ||||||| |||||| | |||| Sbjct 3379 GGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCT 3320 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 ||| ||| |||||| || ||| ||||| |||||| || |||||||||| ||||| Sbjct 3319 CGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 3260 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AA 148996 | ||||||||| |||||| | || ||| || || ||||| || | ||| | Sbjct 3259 AGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCAT 3200 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTA 149050 | | || | ||| || ||| || || | |||||||| ||| ||| || Sbjct 3199 ACCAG--AGCTTCTGGGC-----CTTCATGGTCTT-GCGACCCTTGCCCGCCTTCTCATA 3148 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | |||| |||||| ||||||| ||||| ||| | ||||||||||||| | Sbjct 3147 CTTTTCGTAAAGAGCC--TCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCG 3090 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | || |||||||| | ||| | |||| | | || |||||||| || |||||||| Sbjct 3089 TTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 3030 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | |||||| || | |||||||| || | || || ||| ||| |||| Sbjct 3029 ATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 2970 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 |||| || | || | || |||||||| ||||||| ||| | || | || || Sbjct 2969 AGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 2910 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| ||||||||||||| || | ||||||| || || |||| ||| Sbjct 2909 GGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATG 2850 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCAC 149404 || | || ||| || ||||| ||| ||| ||| | ||| || || | Sbjct 2849 GGGGTGACACCGTTGGAGGTACCGTTGGTACCAGC-GATGTAAGAGCCAGTGGCACGGAT 2791 Query 149405 TTTGTGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463 | ||| ||||| | |||||| || ||||| | ||| ||||| || ||| || Sbjct 2790 TCGGTGGACGTTCAGGCCGATACCACCCGCCAT-CTTGGAGATCATGGCACAGGTCTTGA 2732 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 | || || || ||||| |||||||| |||||| | ||| ||||| ||| ||| Sbjct 2731 GAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACA 2672 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT-C 149582 || || | || || || ||| | ||||||| ||| || || || |||| | Sbjct 2671 GCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGC 2612 Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642 | | ||||| | ||| | ||| || || || || || || || || |||||| | Sbjct 2611 TCG-ACATCAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACA 2553 Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702 | || ||||| | ||| ||||| || ||||| | | ||| |||| ||||| | | Sbjct 2552 GACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGG 2493 Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCA 149762 ||| || || |||||| |||||||||||| ||| | ||||| ||| | | | || Sbjct 2492 TAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACA 2433 Query 149763 ATGGCGGCGTC 149773 ||||| | ||| Sbjct 2432 ATGGCCGAGTC 2422 >seq2597 Length=5433 Score = 152 bits (168), Expect = 5e-32 Identities = 343/511 (67%), Gaps = 17/511 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 4219 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 4160 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || || ||| | ||| | ||||| || Sbjct 4159 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAG 4100 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||| ||||||| |||| | ||||||||||| |||| || Sbjct 4099 GCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGC 4040 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | ||| || | ||||||| ||||||| || || || ||| ||| | Sbjct 4039 GCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTC 3980 Query 120591 GAGCATAG------TG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 | || || |||| ||| |||| | | | | || | || | ||| Sbjct 3979 CTGGATGACCTGCTTGCTGGCACGGCC-CTTGAGGTGG----GAGT---GGAGGA--GGC 3930 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| ||||| || |||||||| || || || ||||||||| ||| ||||||| Sbjct 3929 ATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 3870 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||||| ||| | |||||| |||| |||| ||||||| || ||||| | Sbjct 3869 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 3810 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 ||||| ||| ||||||||||| | |||| || || | || ||||| | || Sbjct 3809 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGA 3750 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCG 120854 |||| |||||||| |||||||| ||||| Sbjct 3749 TCCATCGGATGGCCCAGTCGGCCTTCTTGCG 3719 >seq7763 Length=1926 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| |||| || ||| | | | |||||||||||||||| Sbjct 1034 GGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 1092 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| |||||||||||||| |||||||| |||||||| |||||| || Sbjct 1093 CAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 1152 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || || || || | Sbjct 1153 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGG 1212 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 1213 TCTTGACAAAGATCTGCAT 1231 >seq6050 Length=2754 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || |||||||| |||||| Sbjct 2459 TCCTCCAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 2518 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | || ||| || |||| ||||| | Sbjct 2519 TCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 2578 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 2579 GTCTTGCCCGTCAGGGTCTTCACGAAA 2605 >seq4644 Length=3541 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| |||| | || || || |||||||||||||||| Sbjct 2328 GTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 2385 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| || || ||||| |||||||||||||| |||||| | Sbjct 2386 CGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGATT 2445 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||||| | ||||| || | ||||| || || ||||| || | Sbjct 2446 TCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTCTTTCCGGTGAGGG 2505 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 2506 TCTTGACGAAGATCTGCAT 2524 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| ||| | | || | | | ||||| ||||||||||| Sbjct 2556 GTTGACTCCTTCTGAATATTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 2614 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| ||||| || || ||||| || |||||| ||| Sbjct 2615 GGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTT 2674 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| |||| ||||| || || || || || || Sbjct 2675 GACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGT 2734 Query 133643 TTTTACGA 133650 || |||| Sbjct 2735 CTTGACGA 2742 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||||||| | ||| | | | ||||| |||||||||| Sbjct 2830 GGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCAAGCTGCTTGC 2888 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 2889 CGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACT 2948 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 ||| | || | || || | || ||| || |||| ||| | ||| ||||| |||| Sbjct 2949 TGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGTCA 3005 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| ||| || ||| ||| ||| || |||| Sbjct 2093 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCTTCCAGCT 2151 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || ||||||||||| || |||||||| |||||||| |||| Sbjct 2152 GCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCT 2211 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| || ||| | | ||| || || | |||| ||| || || | Sbjct 2212 TGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGTGATGGTCTTTCCAG 2271 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || || |||||||| Sbjct 2272 TGAGAGTCTTGACAAAGATCTGCAT 2296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483263706368280