Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4116 221 2e-52 >seq4116 Length=4278 Score = 221 bits (244), Expect = 2e-52 Identities = 1116/1753 (64%), Gaps = 43/1753 (2%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 |||| | ||| || |||||||| || ||||| || || | ||||| || | ||| Sbjct 4259 GCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGC 4200 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTT 110471 || | || |||| ||| || || | |||| || ||| | ||| |||| Sbjct 4199 ATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT-- 4142 Query 110472 GGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCC 110531 | ||||||||| || || | || ||||| | || ||| | | | ||| |||| Sbjct 4141 GATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCC 4082 Query 110532 AAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAAC 110591 | || || ||||| ||||| || | ||||| | | ||| ||||||||||||| Sbjct 4081 AGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAAC 4022 Query 110592 CCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGT 110651 | | | | || | | ||||| | | ||||| || || || | |||| Sbjct 4021 CGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGT 3962 Query 110652 CATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGA 110711 | |||| || |||||| | ||||| || |||||| | | | |||||| Sbjct 3961 CCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGA 3902 Query 110712 TGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTG 110771 |||| | ||||| || || ||||| || || || |||| ||| || | || ||| | Sbjct 3901 TGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAG 3842 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| || || | || |||||||| |||| || | |||||||| | ||| ||| Sbjct 3841 TAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCTGA 3782 Query 110832 GAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889 | |||||||| || | || || ||||| |||| ||||||| ||||| || | Sbjct 3781 GGTTCTCCCAGTCCCAGAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAAT 3724 Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATT- 110948 || | || |||||||| |||| ||||| |||| ||| | | | |||| | Sbjct 3723 ACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTG 3664 Query 110949 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 111008 ||| | || |||| || || || ||||| || ||||| | || | ||| Sbjct 3663 CACCGAA-GCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCAC 3605 Query 111009 TGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 111066 || || || || ||| || | ||| || | || || |||| || ||||| || Sbjct 3604 GAGCCTCGGGAGACTCGAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTG 3547 Query 111067 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATA 111126 ||||| | |||||| |||| ||||||||| || || || || | ||| || || Sbjct 3546 GACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTA 3487 Query 111127 AAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG 111186 || ||| || | | ||| || || |||| || ||||| || || | Sbjct 3486 GTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAA 3427 Query 111187 TTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGA 111243 || | | ||| | || || || || | ||| || || ||||| | || Sbjct 3426 CTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGA 3370 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 || | ||||| ||||| |||||| | |||||| | ||| || || || | Sbjct 3369 AGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAG 3310 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||||| || || || |||| ||||| ||||| ||||| |||||| ||||| Sbjct 3309 ATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTT 3250 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 |||||||||| |||| | || ||||| ||||| | | ||| || || | ||| | | | Sbjct 3249 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTT 3190 Query 111423 CGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 | | | || |||| ||| | || | ||| || ||| |||||| ||| || | Sbjct 3189 CTGGGCCT----TCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAG 3134 Query 111480 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 | || |||||||| ||| || ||||| ||||| || || || ||||| | || Sbjct 3133 CCTCGAACTCCTC-GCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGG 3075 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| | ||| | ||| || ||||||||||| || || |||||||| || | Sbjct 3074 GTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGG 3015 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || || || | || |||| || | || ||||| || | ||||||||||| Sbjct 3014 AACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCA 2955 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 111712 | || ||| |||||||| |||||||| |||| || | || || ||| | | Sbjct 2954 AAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG- 2898 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| ||| || || |||||||| || | | ||| Sbjct 2897 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCG 2838 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 111832 | || ||| || || || || ||| | |||| | | |||| || | Sbjct 2837 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTC 2778 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | || ||||| || ||| ||| ||||| ||||| | | ||||| |||| ||| Sbjct 2777 AGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATA 2718 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | || |||||| || || ||| |||||||| ||||| ||| || || Sbjct 2717 CCCTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGA 2658 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGT 112010 |||||||||||||||||||| || | || || |||| | | || |||||| || Sbjct 2657 GTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAATTTGCT--CGACATCAGGT 2600 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||||| |||| ||||| || || || |||||||| | || ||||||| Sbjct 2599 TGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGA 2540 Query 112071 ACATGTACTGTGG 112083 ||||| ||| || Sbjct 2539 TCATGTGCTGGGG 2527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627827913151200