Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4116 259 5e-64
seq1454 152 6e-32
seq2597 100 3e-16
>seq4116
Length=4278
Score = 259 bits (286), Expect = 5e-64
Identities = 501/733 (68%), Gaps = 30/733 (4%)
Strand=Plus/Plus
Query 53233 GCGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCC 53289
|||||||| ||||| ||| || | ||| ||| || | ||| || || ||| | ||
Sbjct 2580 GCGTGTCCTGGAGACCTACAACCTGATGTCGAGCAAA---TTCTTCACCCATGCCTCCCC 2636
Query 53290 AACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGAT 53349
||||| ||||| |||||||| || |||||| |||| ||||||||||| | ||
Sbjct 2637 CACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGACAT 2696
Query 53350 GAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAA 53409
||| || ||| || || || || || || || |||||| |||||| ||||||||
Sbjct 2697 GAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAA 2756
Query 53410 GTGGTCGGGTGGTATCGGTATCCACTGCT--CGAACGTCCGTGCGAACGGCACACCAATC 53467
| | ||||||||||||| | || | |||| ||||||| | ||| | |||
Sbjct 2757 GATGGCGGGTGGTATCGGCCTGAACGTCCACCGAA--TCCGTGCCACTGGCTCTTACATC 2814
Query 53468 AAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACG 53527
|| || ||||| | || | || || || ||||| || ||||||||||||||
Sbjct 2815 GCTGGTACCAACGGTACCTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACT 2874
Query 53528 GCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAG 53587
|||||||||||| |||||||||| ||||| || | || ||||||||||| |||
Sbjct 2875 GCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAG 2934
Query 53588 CCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAG 53647
|| |||||||| || | | ||||| || || ||||| ||| || || | || |||
Sbjct 2935 CCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAG 2994
Query 53648 ATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG 53707
| ||| ||| |||||||| ||||| |||||||| || ||||||||| | ||
Sbjct 2995 GTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTC 3054
Query 53708 GAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGT 53766
|||||| ||| || ||| ||| ||||| || |||||||||||||| || | | ||
Sbjct 3055 GAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTG- 3113
Query 53767 CTACGGTGAGGAGT---------TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCG 53817
||| || ||||||| || |||| | |||| || | | || | |||| ||
Sbjct 3114 CTATGGCGAGGAGTTCGAGGCTCTTTACGAAAAGTAT--GA-GAAGGCGGGCAAGGGTCG 3170
Query 53818 CTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGA 53877
| |||| | ||||| | || | ||| |||| |||||| || ||| ||
Sbjct 3171 C------AAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGA 3224
Query 53878 GACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAA 53937
||| || | || | |||| ||||||||| |||| |||||||||||||||||
Sbjct 3225 GACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAA 3284
Query 53938 CATCGGCGTCATC 53950
| | ||| ||||
Sbjct 3285 CCTGGGCACCATC 3297
Score = 111 bits (122), Expect = 2e-19
Identities = 554/860 (64%), Gaps = 52/860 (6%)
Strand=Plus/Plus
Query 55096 TGACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCAT 55155
|||||| | ||| | ||||| || || | ||||| ||| ||||||||| || | ||
Sbjct 3414 TGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGGATTAT 3473
Query 55156 CGACAAGAATTACTACCCG---ACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCC 55212
|||| ||| ||||||| || ||||| ||||| |||| | || ||||| ||
Sbjct 3474 CGACGTGAACCACTACCCTGTTACGGAAGCT---CGCAACAGCAACATGCGACACCGACC 3530
Query 55213 CATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGAT--TGCCCTTC 55270
||| | | ||||| ||||| | || || ||| | ||||| | |||| |||
Sbjct 3531 CATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCTTTC 3588
Query 55271 GACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGC 55329
|| || ||||| || | ||| || | |||||| || | ||||||| ||| ||
Sbjct 3589 GAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGAC-CATCTACCATGCTGC 3647
Query 55330 GCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTC 55389
||| | ||| || ||||| | | ||||| ||||| || ||| | ||
Sbjct 3648 CCTCACTGCTTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 3707
Query 55390 GCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGG---GGCAAG---TCTGACCCCAT 55443
|| || |||| ||||||||||||| | ||| | ||| ||||||| |
Sbjct 3708 TCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTGAAGCCTTCTGACCTCTG 3767
Query 55444 G---TTTGACAAGTTGA---AGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCT 55497
| | || || | | |||| | || | | ||| | |||||| |||||
Sbjct 3768 GGACTGGGAGAACCTCAGGGAGCAGGTCAAGGA---GCACGGCATTCGCAACAGTCTGCT 3824
Query 55498 CGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGA 55557
| || || ||||| || || || | |||||| |||||||||||||| |||||
Sbjct 3825 GCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTTCGA 3884
Query 55558 GCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAA 55617
||| ||||| |||||||||||| |||||| ||| || || ||||| || | ||
Sbjct 3885 GCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTC--CAGG-TCGT 3941
Query 55618 CAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAG--ATCAAG 55672
||| | | || |||||||||| | || | |||| | | | || ||
Sbjct 3942 CAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGGT--CGGATGCCATGAAA 3999
Query 55673 A--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCTCTGCGTC 55727
| || || |||| |||||| ||| ||||||| || | ||| | ||
Sbjct 4000 AACCGAATCATTGCCGAGAACGGT---TCCATCCAGAACATCCCCAACATCCCCGCCGAG 4056
Query 55728 -TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA---AGAGTCTGATTGACATG 55783
|||||| | ||| ||| || ||||||||| | ||| || ||| || | |||
Sbjct 4057 GTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAG-GTCG--TTCAGATG 4113
Query 55784 AGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAAT 55843
||| || || ||||| | ||| || ||||||||||| || |||||| |||| || |
Sbjct 4114 GCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCACATGAAGGAC 4173
Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903
|| | ||| |||| | | | ||||||||| ||| |||||| || || ||||||
Sbjct 4174 CCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGCCTGAAGACG 4233
Query 55904 GGTATGTACTATCTGCGGAC 55923
|| |||||||| ||||| ||
Sbjct 4234 GGCATGTACTACCTGCGAAC 4253
>seq1454
Length=6865
Score = 152 bits (168), Expect = 6e-32
Identities = 244/347 (70%), Gaps = 10/347 (3%)
Strand=Plus/Plus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| ||||| || | ||||||| || || |||||| ||||| || || || | ||||
Sbjct 2382 AGTCGAGTAAAGGTATAACGAGGACTGGCGGCATCCGAACCACCTGCGAGTCGAGAACCG 2441
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | |||||| ||||| | | ||| | |||||| | ||||||||||| || ||||
Sbjct 2442 AAGTTTCCACTTGGCTCTAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGTGCCAGA 2501
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
|| || || ||||| || ||||| ||||| || |||||||| || | |||
Sbjct 2502 CCGATGATGGTCTGCTGGAGAGATGCTTCACCGTGGTGGTATGCCGTCTGTTCAGACACA 2561
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || |||| | |||||||| |||| |||| |||||| |||||| ||| || |
Sbjct 2562 TAACCAGCCAATTCCACCACCTTCTTGTCCTTGAC--CAGGTTTCTCTTGAAGCAAGCGT 2619
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGA 117596
| | ||||||||||||| ||||| | |||||| || ||||||||| ||| |
Sbjct 2620 AGAGAACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGGATCGATCGC---A 2676
Query 117597 TGTCCTCAGC---GCTAAAGTTGGCCAAGTCCCGGTGGATGAAATCA 117640
||| ||||| ||| ||| | | ||||||| ||||||||||
Sbjct 2677 TGTTATCAGCCATGCTGAAGAGGATGAGCTCCCGGTTGATGAAATCA 2723
Score = 129 bits (142), Expect = 6e-25
Identities = 205/294 (70%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| || ||| | || || | ||||| |||||| |||||||| || || | || ||
Sbjct 2385 CGAGTAAAGGTATAACGAGGACTGGCGGCATCCGAACCACCTGCGAGTCGAGAACCGAAG 2444
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||||| ||| ||||| |||||| | ||||| || ||||| |||| |
Sbjct 2445 TTTCCACTTGGCTCTAGGCAGTTGATGTTGTTCGATCCCACAAAGTTCTGTGCCAGACCG 2504
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
| || || ||| ||| |||||||||||||| || |||||||| || | | ||
Sbjct 2505 ATGATGGTCTGCTGGAGAGATGCTTCACCGTGGTGGTATGCCGTCTGTTCAGACACATAA 2564
Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265
|| ||||| | | |||||||| ||||| | |||||| |||||| || ||||| |
Sbjct 2565 CCAGCCAATTCCACCACCTTCTTGTCCTTGACCAGGTTTCTCTTGAAGCAAGCGTAGAGA 2624
Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTG 152319
||||||||||| || || || || |||| || ||| ||||| ||| ||
Sbjct 2625 ACCTTGCGCTGACCAGGCTTGAAGCCATCCAGGACCGAAGGGATCGATCGCATG 2678
Score = 91.5 bits (100), Expect = 2e-13
Identities = 228/341 (67%), Gaps = 4/341 (1%)
Strand=Plus/Plus
Query 118003 GTTCAGCACGAGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAG 118062
||| | || ||| ||||||||||| || || ||||| ||| ||||||||||||||
Sbjct 3134 GTTGATCAGGAGACCCTTGATATGACTTCCATCGTGATCCTGATCAGTCATGATCATCAG 3193
Query 118063 GCGGCCGTACCGTAAATCTCTCAGGGAGT-TATAAACCTTACCATGTTGGAGCCCGAGGA 118121
||||||| || || |||| | | | | || |||| || | || || ||||
Sbjct 3194 ATGGCCGTATCG-AAGACTCTTGGTGTCTGTGTACACCTGCTTGTGCTTCAGACCCAGGA 3252
Query 118122 TCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAA 118181
|| || | ||| | ||||| || | || | ||| | | | |||| || || |
Sbjct 3253 ACTGCTTGATGTTCTGGATTTCCTGGTTCTTGGTGATCTGGTCGACGCTGGCATCGCGGA 3312
Query 118182 CGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCA-CAACGCTC 118240
||||| || |||||| || ||||| || || |||| | ||| || | | | ||||
Sbjct 3313 CGTTGAGCATCTTACCACGGAGTGGGAAGACACCAATGTGGTCGGGGTCAAGGATGGCTC 3372
Query 118241 AAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCG 118300
|| | || ||| || |||| || |||||||| || || | || |||||||||||
Sbjct 3373 -GTCCAGAAACAGCCAGACCCTTGGCGGAGTCACCTTCAGTCAGGATCAGAGTGCACTCA 3431
Query 118301 GTGCTGCGATGAGTACCGGCCCAATTAGCATCATCCAGCTT 118341
|| || ||||||| ||| | || || || |||||||
Sbjct 3432 TGGCCTCGGCGAGTACCTGCCAAGTTGGCCTCGACCAGCTT 3472
>seq2597
Length=5433
Score = 100 bits (110), Expect = 3e-16
Identities = 535/836 (64%), Gaps = 58/836 (7%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| || || ||||||||||| || | | ||||||||||||||
Sbjct 4215 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 4156
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTGCC-ATGAGG 74579
||||||| ||||| | || ||| | |||||| | | | | | | ||||
Sbjct 4155 AAGTCGAAGGGGTTGGTGGCCTTGTAGAC---CTTCTCGTTGCCGAGGGCGACGAGGAGG 4099
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || || || | ||||||||| |||| | || | |||||||| || |
Sbjct 4098 CGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCG 4039
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697
|| || || |||||||| | ||||| ||| | | | | ||| || | || |
Sbjct 4038 CAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAA--TGGTGACGGCATCGGTGATGATGT 3981
Query 74698 TGTGAATGTCTT------TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACG 74750
|| ||| | | ||| | ||| ||| ||||| |||| || | || |
Sbjct 3980 CCTGGATGACCTGCTTGCTGGCACGGCCCTTG------AGGTGGGAGTGGAGGAGGCATG 3927
Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808
|||| || | || || || || || | || | || || ||||| | ||||
Sbjct 3926 -CAAAGTC--GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 3870
Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868
||||||| || ||||||||||| | ||| ||||||| |||| ||| ||||||||||
Sbjct 3869 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 3810
Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG----GTGCATCGGAAGTC 74924
| || ||||| ||||||||||| || || || || || | || | | |||
Sbjct 3809 TACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTT-----GTC 3755
Query 74925 ----ATCCAAGTCTGA--GCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGAT 74977
||||| || || ||||| || || ||| | | || |||| || || ||
Sbjct 3754 CTGGATCCA--TCGGATGGCCCAGTCGGC-CTTCTTGCGGATACAGGGGATGGTCTCAAT 3698
Query 74978 CGCTTGGAAGAGGCTTGCCTTC--TCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGT 75035
|| | ||||||| | ||| | | || ||||||| | ||||||| | ||
Sbjct 3697 GGCGTTGAAGAGG--TAGGTTCGTTGAGCTGGCTCCTTGATGTAGGTGTCAATGAGGAGC 3640
Query 75036 GAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCC 75095
||||| ||||| || || || ||| | | |||| | ||||||| | || |||
Sbjct 3639 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCC 3580
Query 75096 TCTGCAATCTGTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGT 75153
|| | ||||| || | || |||| || | | | ||||| ||||||||||||
Sbjct 3579 TCGGGGATCTGGACCTCGCCGCTGAATCGCTC--GACAAGGTTCTCGTTGACGATGCCGT 3522
Query 75154 CCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGT---GA 75210
| ||||| ||||| || || || | || ||| |||| ||| |||| |
Sbjct 3521 CAGAGGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGC 3462
Query 75211 GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266
| |||| ||| || | || ||| | | ||||||||||||| | |||||||||
Sbjct 3461 GGTTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAA 3406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547038175320600
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