Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq7038 109 4e-19
seq4683 84.2 2e-11
>seq7038
Length=2261
Score = 109 bits (120), Expect = 4e-19
Identities = 200/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818
|||||||| || |||| | |||||||| ||||| | |||| | ||| ||| ||
Sbjct 580 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 522
Query 29819 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874
|| || | | ||| ||| |||||| | |||||| | ||| ||||| || ||
Sbjct 521 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 462
Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTC 29933
|| | ||||||| || ||||||||||| || || |||| | ||| | | || |
Sbjct 461 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCT-GC 403
Query 29934 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993
| || | | || |||||| |||||||||| || || || | ||||||||| ||||
Sbjct 402 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 343
Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
| || || || ||||| |||||||| | || | ||||||||| || ||
Sbjct 342 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGTTGGCA 294
>seq4683
Length=3708
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/228 (70%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291
|||||| || || || || | ||| ||||| |||||||| || || || || || | ||
Sbjct 30 GTACTCGGCGCCAAAGTGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTC 89
Query 30292 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351
| ||| | || ||| ||||| | || || | ||| || ||| |||||||||||||
Sbjct 90 GCGGTGGTTGAGGCCGAGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTT 149
Query 30352 --TACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAG 30408
| || | || | ||| ||| ||||| |||| ||||| || |||||| || ||
Sbjct 150 GATGCCGGCCTCGCTGAG-GCT-GGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAG 206
Query 30409 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
||| | | |||||| ||||| | |||||| |||||||||||
Sbjct 207 CTCGGCGATGACGGCGCGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406181665247724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |