Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4644 107 4e-18 seq6050 98.7 2e-15 seq7763 93.3 1e-13 >seq4644 Length=3541 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||||||||| || ||||| || ||||||||||| |||| | || | Sbjct 2078 GAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 2137 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || || |||||||| | ||||||||| | | ||| || || Sbjct 2138 ACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTC 2197 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || || | || | | | || ||| || || ||||| Sbjct 2198 CTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCGACCTCCAGAGT 2257 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||| || |||| |||||| Sbjct 2258 GATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 2296 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || ||||| ||||| || ||||||||||| ||| | ||||| || || Sbjct 2313 AGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 2372 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||| || || | | || |||||||| || Sbjct 2373 TCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCC 2432 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | | |||| || || || ||||| || ||||| Sbjct 2433 TGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACCTCAAGGGTGATAGTC 2492 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||||| |||||| Sbjct 2493 TTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 2524 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||||| || |||||||||||||||| | ||| | ||||| Sbjct 2815 GAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATC 2874 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || |||||||| || || | ||||||||| | | ||| || ||||| || Sbjct 2875 CTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 2934 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | | | || || ||| || || || ||||| || Sbjct 2935 CTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGT 2994 Query 152072 TTTGCCCGT 152080 |||||||| Sbjct 2995 CTTGCCCGT 3003 >seq6050 Length=2754 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | |||| ||||| || || || || |||||||| Sbjct 2426 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 2485 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||| || ||||| || || || || |||||| | || Sbjct 2486 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 2545 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | | |||| || ||| || || || || || || |||||||| || ||||||||||| Sbjct 2546 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2604 >seq7763 Length=1926 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||| || ||||||||||| ||| | || | ||||| Sbjct 1019 GAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 1078 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | ||||||||| | | ||| || ||||| || Sbjct 1079 CTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 1138 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| ||| ||| || || || || || || Sbjct 1139 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGT 1198 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 || |||||||| ||||| || |||| |||||| || || Sbjct 1199 CTTCCCCGTGAGGGTCTTGACAAAGATCTGCATCTTGCC 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153436477795987