Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq45 158 1e-33
>seq45
Length=5506958
Score = 158 bits (174), Expect = 1e-33
Identities = 236/333 (71%), Gaps = 19/333 (6%)
Strand=Plus/Minus
Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595
||| |||| ||||| ||||| ||||||| ||| |||| ||| |||| | | |||||
Sbjct 4038843 TTATACCGACATCTTCATGGCGATGGCCTTGTGTGGGTCGTATCCCTTAACGACGAAGTC 4038784
Query 145596 CTCCGCCCTGAAGTCATCTATGTC-----CTCCACCCGCCTCAGG----------ATCCT 145640
||| | | || | || |||| | || ||| ||| || |||
Sbjct 4038783 CTCAAGCTTCCAGCCGTCGATGTTTCCGTCGCCGACCGTCTCGGGCGGACGGGCGATCTC 4038724
Query 145641 GAGC-CTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGG 145698
||| | ||||| |||| ||||||| | || |||||| ||||| || ||||||
Sbjct 4038723 GAGATCCGGGAAGGGGC--GGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGG 4038666
Query 145699 TTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTG 145758
| || ||||||||| ||||| |||| ||||||| | | ||||||| ||||| | |
Sbjct 4038665 TCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAG 4038606
Query 145759 AGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGC 145818
|||||||| ||||| |||||||| |||||||| || ||||||||||| || |||||
Sbjct 4038605 GCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGG 4038546
Query 145819 CCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|||||||| | || |||||||| |||||||||
Sbjct 4038545 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 4038513
Score = 156 bits (172), Expect = 5e-33
Identities = 369/545 (68%), Gaps = 33/545 (6%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | |||||||||||||||| ||||| | ||| ||| ||||
Sbjct 4038359 ACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGACCATGAGGTGCATGTCGCGCGGG 4038300
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC---GGGGTTCCTCTTG-ATCTCCCCTAT 145985
||||||||| |||||| || | | || || |||| || || | | || | |
Sbjct 4038299 TTCCAGGCGCTGAGGATGA---TGCGGCGGTCAAAGGGGCTC-TCGCGCAGCTTGCGCAC 4038244
Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045
| || ||||||||| |||||||| || ||| || ||||| | |||| |||| |
Sbjct 4038243 GACCTCGGCGAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCTTTGCGTCCTTGTACTC 4038184
Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105
||| || ||||| | ||||||||| ||||||||||| || ||||| ||| || | |||
Sbjct 4038183 GGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTG 4038124
Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
| ||| ||| | | |||||| || || || |||||| |||||||||| || ||
Sbjct 4038123 CTGCAGGCCGAGCGAGTTGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACCCC 4038064
Query 146166 --CCTCGCGGA-GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222
|||||| | | || | ||| ||| ||| | |||||| ||||||||
Sbjct 4038063 AGCCTCGCTCAGGGGCGCCGACGAG---GTGCTGCCCGACACGAACCACAGCAGCTCGAG 4038007
Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG--GAACTGGCC--CCG-- 146276
|| ||| | | | ||||| | |||||| |||||||| || | || |||| |||
Sbjct 4038006 GATGACGGCGCGCGTAAAGACGCGCTTGGTCGTCAGCAGCGGCAGCACCGGCCTGCCGTC 4037947
Query 146277 ------CAGGGAGTACTTG---GCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGT 146327
|| | | ||||| | | | | |||||||||| ||||||| |||||
Sbjct 4037946 GCGGTTGAGAGCGAACTTGAGCGGCCGCGGCGCGAAGACGGAGTAGGTGCCCGTCCCCGT 4037887
Query 146328 CCTGTCCCCCCTGCGCAC-CCCGT-TCGCCAGGATCTCCCTGACGGTGTTGAGGTACTGG 146385
| ||| || | || | ||||| ||| |||||||| | || || ||||||||||
Sbjct 4037886 GCGGTCGGGCCGGTGCTCGCCCGTGTCG--AGGATCTCGCGCACCAGGTCGAGGTACTGG 4037829
Query 146386 TGCTC 146390
|||||
Sbjct 4037828 TGCTC 4037824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076209923200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |