Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq45 158 1e-33 >seq45 Length=5506958 Score = 158 bits (174), Expect = 1e-33 Identities = 236/333 (71%), Gaps = 19/333 (6%) Strand=Plus/Minus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| |||| ||||| ||||| ||||||| ||| |||| ||| |||| | | ||||| Sbjct 4038843 TTATACCGACATCTTCATGGCGATGGCCTTGTGTGGGTCGTATCCCTTAACGACGAAGTC 4038784 Query 145596 CTCCGCCCTGAAGTCATCTATGTC-----CTCCACCCGCCTCAGG----------ATCCT 145640 ||| | | || | || |||| | || ||| ||| || ||| Sbjct 4038783 CTCAAGCTTCCAGCCGTCGATGTTTCCGTCGCCGACCGTCTCGGGCGGACGGGCGATCTC 4038724 Query 145641 GAGC-CTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGG 145698 ||| | ||||| |||| ||||||| | || |||||| ||||| || |||||| Sbjct 4038723 GAGATCCGGGAAGGGGC--GGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGG 4038666 Query 145699 TTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTG 145758 | || ||||||||| ||||| |||| ||||||| | | ||||||| ||||| | | Sbjct 4038665 TCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAG 4038606 Query 145759 AGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGC 145818 |||||||| ||||| |||||||| |||||||| || ||||||||||| || ||||| Sbjct 4038605 GCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGG 4038546 Query 145819 CCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 |||||||| | || |||||||| ||||||||| Sbjct 4038545 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 4038513 Score = 156 bits (172), Expect = 5e-33 Identities = 369/545 (68%), Gaps = 33/545 (6%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||||||||||||| ||||| | ||| ||| |||| Sbjct 4038359 ACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGACCATGAGGTGCATGTCGCGCGGG 4038300 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC---GGGGTTCCTCTTG-ATCTCCCCTAT 145985 ||||||||| |||||| || | | || || |||| || || | | || | | Sbjct 4038299 TTCCAGGCGCTGAGGATGA---TGCGGCGGTCAAAGGGGCTC-TCGCGCAGCTTGCGCAC 4038244 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 | || ||||||||| |||||||| || ||| || ||||| | |||| |||| | Sbjct 4038243 GACCTCGGCGAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCTTTGCGTCCTTGTACTC 4038184 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || ||||| | ||||||||| ||||||||||| || ||||| ||| || | ||| Sbjct 4038183 GGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTG 4038124 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 | ||| ||| | | |||||| || || || |||||| |||||||||| || || Sbjct 4038123 CTGCAGGCCGAGCGAGTTGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACCCC 4038064 Query 146166 --CCTCGCGGA-GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 |||||| | | || | ||| ||| ||| | |||||| |||||||| Sbjct 4038063 AGCCTCGCTCAGGGGCGCCGACGAG---GTGCTGCCCGACACGAACCACAGCAGCTCGAG 4038007 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG--GAACTGGCC--CCG-- 146276 || ||| | | | ||||| | |||||| |||||||| || | || |||| ||| Sbjct 4038006 GATGACGGCGCGCGTAAAGACGCGCTTGGTCGTCAGCAGCGGCAGCACCGGCCTGCCGTC 4037947 Query 146277 ------CAGGGAGTACTTG---GCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGT 146327 || | | ||||| | | | | |||||||||| ||||||| ||||| Sbjct 4037946 GCGGTTGAGAGCGAACTTGAGCGGCCGCGGCGCGAAGACGGAGTAGGTGCCCGTCCCCGT 4037887 Query 146328 CCTGTCCCCCCTGCGCAC-CCCGT-TCGCCAGGATCTCCCTGACGGTGTTGAGGTACTGG 146385 | ||| || | || | ||||| ||| |||||||| | || || |||||||||| Sbjct 4037886 GCGGTCGGGCCGGTGCTCGCCCGTGTCG--AGGATCTCGCGCACCAGGTCGAGGTACTGG 4037829 Query 146386 TGCTC 146390 ||||| Sbjct 4037828 TGCTC 4037824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076209923200