Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq67 122 8e-23
seq1 107 2e-18
seq23 96.9 3e-15
>seq67
Length=2709248
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||| | ||| || ||||||||||| || || ||| |
Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| || |||||||| |||||||| || ||||||||||| ||| || || || |
Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATT 459059
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||||| ||| ||||| | ||| | || ||||| ||||| ||||| ||
Sbjct 459060 GTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGAC 459119
Query 118727 AAAAATCTGCAT 118738
|||||||||||
Sbjct 459120 GAAAATCTGCAT 459131
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||| || || ||||||||||| || |||||| |||||
Sbjct 458694 CACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTC 458753
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| | ||| |||||||| || || || ||||||||||||
Sbjct 458754 CAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTG 458813
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||| | |||||| || | || | || ||
Sbjct 458814 AATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTT 458873
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || || || || || ||||||||
Sbjct 458874 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||||| || ||||| || ||||||||||| || || || || |||
Sbjct 458463 CAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATC 458522
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT- 118644
||| ||||| || || ||| |||| || |||||||| || ||||| ||||||||||| |
Sbjct 458523 CTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATC 458582
Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACC 118703
||| | || | ||| || | || | || || | || | ||||| |||| || |
Sbjct 458583 CTGGATCTTGCTCTTT-ACGTTATCAATCGTATCGGATGAT-TCGACTTCGAGCGTGATG 458640
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| || |||| || || || || |||||||||
Sbjct 458641 GTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
Score = 95.1 bits (104), Expect = 1e-14
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||||||||| |||||||| || | || || |||||||| || || |||
Sbjct 459163 GTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGTTGCTTGCCA 459222
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| |||||||| |||||||| || ||||||||||| || || ||
Sbjct 459223 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 459282
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716
|| | |||| ||| || | ||| ||||||| ||| | || ||||| ||||
Sbjct 459283 ACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCA 459337
>seq1
Length=15654088
Score = 107 bits (118), Expect = 2e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || ||| || |||||| ||||| || |||||| | |||
Sbjct 11956324 TTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATG 11956383
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| |||||||| |||||||||||||| || || || || | |||
Sbjct 11956384 AGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 11956443
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||||| | ||||||||| | || | || ||||| || || || || || ||
Sbjct 11956444 ATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGAA 11956502
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACG 133281
||||||| || || |||||||||||||| ||||| | | || | || |||||| | |
Sbjct 14220014 GGTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGG 14220073
Query 133282 GTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCA 133341
| ||||| | ||||||||||| || ||||||| ||| | || ||||||||| |||||
Sbjct 14220074 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCA 14220133
Query 133342 CCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGT 133377
| | || ||||| | || |||| || || ||||
Sbjct 14220134 CAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGT 14220169
>seq23
Length=7462253
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/193 (72%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || |||||||| ||| || ||||| |||||| |||||||| || || |
Sbjct 7209962 CTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAA 7209903
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| || |||||||| || || || |||||||||||||| || || || || |
Sbjct 7209902 GATCAGGCGCTGCTGGTCAGGGGG-ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 7209844
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||||| | ||| ||||| | ||| | || ||||| || || || || ||
Sbjct 7209843 GTCGATCGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 7209784
Query 118727 AAAAATCTGCATG 118739
||| |||||||||
Sbjct 7209783 AAAGATCTGCATG 7209771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829977015360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |